RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GTF2H2CQ6P1K8 395 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 LINGO4Q6UY18 593 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 DPY19L3Q6ZPD9 716 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 NOXA1Q86UR1 476 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 LRRTM3Q86VH5 581 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 GPR65Q8IYL9 337 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 RGL4Q8IZJ4 473 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 CLECL1Q8IZS7 167 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 PJA1Q8NG27 643 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 OR9Q2Q8NGE9 314 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 OR8H1Q8NGG4 311 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 HCAR2Q8TDS4 363 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 NELL1Q92832 810 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 MTERF3Q96E29 417 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 MYEOVQ96EZ4 313 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 TRMT61AQ96FX7 289 aaKnown RBP7.41□□□□□ -1.22
NEDD9-208ENST00000504387 IMP4Q96G21 291 aaKnown RBP7.41□□□□□ -1.22
NEDD9-208ENST00000504387 HSH2DQ96JZ2 352 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 APOLD1Q96LR9 279 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 SLC9A7Q96T83 725 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 HDHD5Q9BXW7 423 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 SYTL2Q9HCH5 934 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 TLR8Q9NR97 1041 aaKnown RBP7.41□□□□□ -1.22
NEDD9-208ENST00000504387 WWOXQ9NZC7 414 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 RAPGEFL1Q9UHV5 662 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 DUSP12Q9UNI6 340 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 KCNH4Q9UQ05 1017 aa7.41□□□□□ -1.22
NEDD9-208ENST00000504387 MKI67P46013 3256 aaKnown RBP7.41□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF646O15015 1829 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ISPDA4D126 451 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 CCDC182A6NF36 153 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ARL5CA6NH57 179 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 TBKBP1A7MCY6 615 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 LOC730098B7Z3J9 87 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 J3KTA2 159 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 HAS3O00219 553 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 AREL1O15033 823 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 KPNA5O15131 536 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 SCO2O43819 266 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ULK1O75385 1050 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PSIP1O75475 530 aaKnown RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 MC4RP32245 332 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 RYKP34925 604 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 RFX2P48378 723 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 SMSP52788 366 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 TWF1Q12792 350 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PYDC2Q56P42 97 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PIK3R6Q5UE93 754 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PRSS48Q7RTY5 328 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PLEKHH3Q7Z736 793 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF605Q86T29 641 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 GHDCQ8N2G8 530 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 YIPF7Q8N8F6 280 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ATAD1Q8NBU5 361 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 OR7D4Q8NG98 312 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 APH1BQ8WW43 257 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 IGSF8Q969P0 613 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ASB2Q96Q27 587 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PANX1Q96RD7 426 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 BRINP2Q9C0B6 783 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 MUC13Q9H3R2 512 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 TFB2MQ9H5Q4 396 aaKnown RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 FAM105AQ9NUU6 356 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 STMN3Q9NZ72 180 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 NEUROG3Q9Y4Z2 214 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 LYVE1Q9Y5Y7 322 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 DNAH14Q0VDD8 3507 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 SLC35F4A4IF30 521 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 VPS4BO75351 444 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 VPS26AO75436 327 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 RPP40O75818 363 aaKnown RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 SOX14O95416 240 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 HPRP00739 348 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 RPS17P08708 135 aaKnown RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ADRA2AP08913 450 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ADORA3P0DMS8 318 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 POU3F3P20264 500 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 RPS19P39019 145 aaKnown RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PBX3P40426 434 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 RGRP47804 291 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 OR3A3P47888 321 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 LHX1P48742 406 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 CDH12P55289 794 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 SCAPQ12770 1279 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 STARD3Q14849 445 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 TYSND1Q2T9J0 566 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 FLYWCH1Q4VC44 716 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 RNASE12Q5GAN4 147 aaKnown RBP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 XKR7Q5GH72 579 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 TMPRSS11AQ6ZMR5 421 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 SLC34A3Q8N130 599 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 FLCNQ8NFG4 579 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 DEDD2Q8WXF8 326 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 DPF3Q92784 378 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 UPF1Q92900 1129 aaKnown RBP eCLIP7.4□□□□□ -1.22
NEDD9-208ENST00000504387 PHF21AQ96BD5 680 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ZSCAN5AQ9BUG6 496 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 ASPNQ9BXN1 380 aa7.4□□□□□ -1.22
NEDD9-208ENST00000504387 TMEM121BQ9BXQ6 578 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms