RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PCM1Q15154 2024 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 SH3PXD2BA1X283 911 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 EVPLLA8MZ36 301 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 hCG_2039718K7EN88 272 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 BCKDKO14874 412 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 SLC16A6O15403 523 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 DIRAS1O95057 198 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 KCNK5O95279 499 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 GSTM1P09488 218 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 IGFBP5P24593 272 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 HNRNPFP52597 415 aaKnown RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 GSTM4Q03013 218 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CSTF3Q12996 717 aaKnown RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 RAPSNQ13702 412 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CCSMST1Q4G0I0 132 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 XKR6Q5GH73 641 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 TMEM215Q68D42 235 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 LILRA6Q6PI73 481 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 NEK10Q6ZWH5 1172 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 VTCN1Q7Z7D3 282 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 ADIPOR2Q86V24 386 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 PTOV1Q86YD1 416 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CROCCP3Q8IVE0 287 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 LILRA3Q8N6C8 439 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CDC26Q8NHZ8 85 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 RAB2BQ8WUD1 216 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 SORCS1Q8WY21 1168 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 TCEAL4Q96EI5 215 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 NRBF2Q96F24 287 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 DGCR6LQ9BY27 220 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 GABARAPL1Q9H0R8 117 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 FAM83DQ9H4H8 585 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 ASAH2Q9NR71 780 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 RHBDL2Q9NX52 303 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 BLOC1S6Q9UL45 172 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 BTBD3Q9Y2F9 522 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 WASH3PC4AMC7 463 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 CFAP99D6REC4 459 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 KPNA5O15131 536 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 AXIN1O15169 862 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 XPNPEP2O43895 674 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 PFDN1O60925 122 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 LEFTY1O75610 366 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 FGF18O76093 207 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 SLCO2B1O94956 709 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ETHE1O95571 254 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 FTH1P02794 183 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 SEMG1P04279 462 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ITGAMP11215 1152 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 CYP4B1P13584 511 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 COX7A2P14406 83 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ZNF30P17039 623 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 PCMT1P22061 227 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 VIPR1P32241 457 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 PREPP48147 710 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 TRPC1P48995 793 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 RAD23AP54725 363 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 WDR5P61964 334 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 POLR2LP62875 67 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 VLDLRP98155 873 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ABRQ12979 859 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 GTF2H3Q13889 308 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 DOC2AQ14183 400 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 VMACQ2NL98 169 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ZC3H12BQ5HYM0 836 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 LIPJQ5W064 366 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ZNF621Q6ZSS3 439 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 THOC6Q86W42 341 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 FBLIM1Q8WUP2 373 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ASZ1Q8WWH4 475 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 MUL1Q969V5 352 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 FKBP10Q96AY3 582 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 OR4K3Q96R72 315 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 RIOK2Q9BVS4 552 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 RNF208Q9H0X6 261 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 PCDH12Q9NPG4 1184 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 IL1RAPQ9NPH3 570 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 SPATA6Q9NWH7 488 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 VPS29Q9UBQ0 182 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 AASSQ9UDR5 926 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 NAALAD2Q9Y3Q0 740 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ORC6Q9Y5N6 252 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 MTCL1Q9Y4B5 1905 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 ABHD14A-ACY1A0A1B0GW23 586 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 MAGEB17A8MXT2 336 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 MYO1GB0I1T2 1018 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 PTGES3LE9PB15 166 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 TSPAN6O43657 245 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 UGDHO60701 494 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 XYLBO75191 536 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 SH3BGRLO75368 114 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 PSIP1O75475 530 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 EPN2O95208 641 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 CPSF4O95639 269 aaKnown RBP9.54□□□□□ -0.88
CLIP1-204ENST00000501271 LAMP1P11279 417 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 TYRP14679 529 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 GPX2P18283 190 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 HTR1BP28222 390 aa9.54□□□□□ -0.88
CLIP1-204ENST00000501271 RYKP34925 604 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms