RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 NAT9Q9BTE0 207 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 SLC26A1Q9H2B4 701 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ZNF304Q9HCX3 659 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ABCF3Q9NUQ8 709 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 UTP6Q9NYH9 597 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 C5AR2Q9P296 337 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 TRMT6Q9UJA5 497 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 CDC23Q9UJX2 597 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 NXT1Q9UKK6 140 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 PLAAQ9Y263 795 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 MAU2Q9Y6X3 613 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 SHANK1Q9Y566 2161 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 CPAMD8Q8IZJ3 1885 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 MYO18BQ8IUG5 2567 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 IGKV1-8A0A0C4DH67 115 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 E7ENX8 843 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 H0YGG7 62 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SMAPO00193 183 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 KLHL41O60662 606 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 VPS4BO75351 444 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SORBS2O94875 1100 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 MED26O95402 600 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 EZRP15311 586 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 MMP11P24347 488 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 IVDP26440 423 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 IMPA1P29218 277 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SKIV2L2P42285 1042 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 PAFAH1B1P43034 410 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 CD97P48960 835 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 RGS4P49798 205 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 ARF3P61204 181 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 ABATP80404 500 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 DR1Q01658 176 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 TAP2Q03519 686 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 AIMP2Q13155 320 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 MYBPC3Q14896 1274 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 MORF4L2Q15014 288 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 MUM1Q2TAK8 710 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 PRTGQ2VWP7 1150 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 THEMIS2Q5TEJ8 643 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 ZNF425Q6IV72 752 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 JMJD6Q6NYC1 403 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 PRMT9Q6P2P2 845 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 FBXO42Q6P3S6 717 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SHISA6Q6ZSJ9 500 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SYDE1Q6ZW31 735 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 PIWIL4Q7Z3Z4 852 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 ADCK2Q7Z695 626 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 ATCAYQ86WG3 371 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 PAQR7Q86WK9 346 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 CREG2Q8IUH2 290 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 TMEM151BQ8IW70 566 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 CNTN4Q8IWV2 1026 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 PDIK1LQ8N165 341 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 GALNT16Q8N428 558 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 DTWD1Q8N5C7 304 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 CPT1CQ8TCG5 803 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 EEF1AKMT1Q8WVE0 214 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 RERGQ96A58 199 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 COL26A1Q96A83 441 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 CERS2Q96G23 380 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 CABS1Q96KC9 395 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 NDNQ99608 321 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SPSB2Q99619 263 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 NAPGQ99747 312 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SLAMF7Q9NQ25 335 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SEMA3GQ9NS98 782 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 TAS2R13Q9NYV9 303 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 CTSFQ9UBX1 484 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 ZNF282Q9UDV7 671 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 VPS4AQ9UN37 437 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SAR1BQ9Y6B6 198 aa8.09□□□□□ -1.11
HMGXB4-207ENST00000498212 SCN2AQ99250 2005 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 VSTM2BA6NLU5 285 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CCDC188H7C350 402 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 MASP2O00187 686 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 SOCS6O14544 535 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 HAT1O14929 419 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 PRPF4O43172 522 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 ALOX12BO75342 701 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 IPO13O94829 963 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 AHSGP02765 367 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 ALPPP05187 535 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 C8GP07360 202 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 ZGLP1P0C6A0 271 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 FBLP22087 321 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 ITGA3P26006 1051 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 GABRB3P28472 473 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 ELK3P41970 407 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CARSP49589 748 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 SOX8P57073 446 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 TBPL1P62380 186 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 TIAL1Q01085 375 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 OCA2Q04671 838 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 KLC1Q07866 573 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 SP140Q13342 867 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 RBBP7Q16576 425 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms