RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
AFF3-215ENST00000498090 ANTXRLA6NF34 631 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 SMAD6O43541 496 aaKnown RBP12.07□□□□□ -0.48
AFF3-215ENST00000498090 CREG1O75629 220 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 CCNDBP1O95273 360 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 CLDN7O95471 211 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 MT-ND1P03886 318 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 BCKDHAP12694 445 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 SRCP12931 536 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 RPL10P27635 214 aaKnown RBP12.07□□□□□ -0.48
AFF3-215ENST00000498090 RPIAP49247 311 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 ARHGDIAP52565 204 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 AP1S2P56377 157 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 SNRPD1P62314 119 aaKnown RBP12.07□□□□□ -0.48
AFF3-215ENST00000498090 ARHGEF7Q14155 803 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 DMC1Q14565 340 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 ITPRIPL2Q3MIP1 535 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 LINC00299Q6ZSB3 139 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 NEK10Q6ZWH5 1172 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 PGBD3Q8N328 593 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 SLC44A3Q8N4M1 653 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 L3MBTL4Q8NA19 623 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 SETD9Q8NE22 299 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 OR2AP1Q8NGE2 309 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 LKAAEAR1Q8TD35 194 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 CSGALNACT1Q8TDX6 532 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 WFIKKN2Q8TEU8 576 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 STARD8Q92502 1023 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 METTL2AQ96IZ6 378 aaKnown RBP12.07□□□□□ -0.48
AFF3-215ENST00000498090 RPL10LQ96L21 214 aaKnown RBP12.07□□□□□ -0.48
AFF3-215ENST00000498090 MRGPRX3Q96LB0 322 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 CPPED1Q9BRF8 314 aaPredicted RBP12.07□□□□□ -0.48
AFF3-215ENST00000498090 TM6SF2Q9BZW4 377 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 PAIP1Q9H074 479 aaKnown RBP12.07□□□□□ -0.48
AFF3-215ENST00000498090 SLC25A37Q9NYZ2 338 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 MAPRE3Q9UPY8 281 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 PDE10AQ9Y233 779 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 TTC28Q96AY4 2481 aa12.07□□□□□ -0.48
AFF3-215ENST00000498090 IGLV3-16A0A075B6K0 115 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PRRT4C9JH25 899 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 FFAR3O14843 346 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 SLC16A6O15403 523 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 GPR42O15529 346 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 GPR39O43194 453 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 NARSO43776 548 aaKnown RBP12.06□□□□□ -0.48
AFF3-215ENST00000498090 NUAK1O60285 661 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 UGDHO60701 494 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 MRPS14O60783 128 aaKnown RBP12.06□□□□□ -0.48
AFF3-215ENST00000498090 UGT2B11O75310 529 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ZNF821O75541 412 aaPredicted RBP12.06□□□□□ -0.48
AFF3-215ENST00000498090 ATE1O95260 518 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 CCDC159P0C7I6 412 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ITGAMP11215 1152 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ZNF12P17014 697 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 MAP4P27816 1152 aaKnown RBP12.06□□□□□ -0.48
AFF3-215ENST00000498090 MAGEA2P43356 314 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 TRPC1P48995 793 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 HMGCS1Q01581 520 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 GBX1Q14549 363 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PON2Q15165 354 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PTPRRQ15256 657 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 NEDD8Q15843 81 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 C6orf141Q5SZD1 244 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 IER5LQ5T953 404 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ERICH5Q6P6B1 374 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 KLHL35Q6PF15 583 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 SERPINA11Q86U17 422 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 MSRB3Q8IXL7 192 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 CLDN19Q8N6F1 224 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 BEND7Q8N7W2 519 aaPredicted RBP12.06□□□□□ -0.48
AFF3-215ENST00000498090 FBXO30Q8TB52 745 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 CYB5D2Q8WUJ1 264 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 SELENOMQ8WWX9 145 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 NCLNQ969V3 563 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ZNF566Q969W8 418 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 SCRN2Q96FV2 425 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PYURFQ96I23 114 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 HBEGFQ99075 208 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 CPEB1Q9BZB8 566 aaKnown RBP12.06□□□□□ -0.48
AFF3-215ENST00000498090 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ELOVL6Q9H5J4 265 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ARL15Q9NXU5 204 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 DEC1Q9P2X7 70 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PSME2Q9UL46 239 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ERVW-1Q9UQF0 538 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 HS3ST2Q9Y278 367 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 SNX5Q9Y5X3 404 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PRKD3O94806 890 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PCNAP12004 261 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ITGB6P18564 788 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 CYP2A7P20853 494 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ELK4P28324 431 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 SOX11P35716 441 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 GDF5P43026 501 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 GZMMP51124 257 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 CTBSQ01459 385 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 NFATC3Q12968 1075 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 ZIK1Q3SY52 487 aaPredicted RBP12.06□□□□□ -0.48
AFF3-215ENST00000498090 TJAP1Q5JTD0 557 aa12.06□□□□□ -0.48
AFF3-215ENST00000498090 PLEKHS1Q5SXH7 462 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms