RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 ZDHHC2Q9UIJ5 367 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 HOOK1Q9UJC3 728 aaKnown RBP3.68□□□□□ -1.82
TRIM4-205ENST00000496896 PYCARDQ9ULZ3 195 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 GRIP1Q9Y3R0 1128 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 LAMB4A4D0S4 1761 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF142P52746 1687 aaPredicted RBP3.68□□□□□ -1.82
TRIM4-205ENST00000496896 SALL1Q9NSC2 1324 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 KIF13AQ9H1H9 1805 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 RGPD8O14715 1765 aaPredicted RBP3.67□□□□□ -1.82
TRIM4-205ENST00000496896 SCN11AQ9UI33 1791 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF197O14709 1029 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 PAPSS1O43252 624 aaPredicted RBP3.67□□□□□ -1.82
TRIM4-205ENST00000496896 ZSCAN12O43309 604 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 CREG1O75629 220 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 VPREB1P12018 145 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 SKILP12757 684 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 ACSL1P33121 698 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 SNX16P57768 344 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 HERV-K104P61576 105 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 CX3CL1P78423 397 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 CDR2Q01850 454 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 KRT33BQ14525 404 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 RABL6Q3YEC7 729 aaPredicted RBP3.67□□□□□ -1.82
TRIM4-205ENST00000496896 MCMDC2Q4G0Z9 681 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 RAB41Q5JT25 222 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 TCTE1Q5JU00 501 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 LUZP1Q86V48 1076 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 DNAJC22Q8N4W6 341 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 OR2T11Q8NH01 316 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 OLIG1Q8TAK6 271 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 FGFBP3Q8TAT2 258 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 ZNRF4Q8WWF5 429 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 MRPS27Q92552 414 aaKnown RBP3.67□□□□□ -1.82
TRIM4-205ENST00000496896 EGFL8Q99944 293 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 FGFBP2Q9BYJ0 223 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 SYNCQ9H7C4 482 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 INTS9Q9NV88 658 aaKnown RBP3.67□□□□□ -1.82
TRIM4-205ENST00000496896 MIS18AQ9NYP9 233 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 RHCGQ9UBD6 479 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF148Q9UQR1 794 aa3.67□□□□□ -1.82
TRIM4-205ENST00000496896 DDX60Q8IY21 1712 aaKnown RBP3.67□□□□□ -1.82
TRIM4-205ENST00000496896 PTGES3LE9PB15 166 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 GAPDHSO14556 408 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 VILLO15195 856 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CDC123O75794 336 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CIAO1O76071 339 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 H2AFXP16104 143 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CA4P22748 312 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 HADHAP40939 763 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 RXRGP48443 463 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 LMO4P61968 165 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CBX1P83916 185 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CCZ1BP86790 482 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CCZ1P86791 482 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CDK3Q00526 305 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CYP4A22Q5TCH4 519 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 DHRS7BQ6IAN0 325 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 FAM180BQ6P0A1 224 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF530Q6P9A1 599 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 TMCO3Q6UWJ1 677 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 HAUS6Q7Z4H7 955 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 TBC1D1Q86TI0 1168 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 PIGZQ86VD9 579 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 CCAR2Q8N163 923 aaKnown RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 MAPKAPK5-AS1Q8N8E1 139 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 BMPERQ8N8U9 685 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 TRIML1Q8N9V2 468 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 SPC24Q8NBT2 197 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 SUSD6Q92537 303 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 SAT2Q96F10 170 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 C16orf45Q96MC5 204 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF830Q96NB3 372 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 SYT11Q9BT88 431 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 LMF2Q9BU23 707 aaKnown RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 FTOQ9C0B1 505 aaKnown RBP eCLIP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 P2RY12Q9H244 342 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 ZHX3Q9H4I2 956 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 SDR39U1Q9NRG7 319 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 RNF186Q9NXI6 227 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 PSD3Q9NYI0 1048 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 WSB2Q9NYS7 404 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 PAK5Q9P286 719 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 SUCLA2Q9P2R7 463 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 ASIC3Q9UHC3 531 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 HACL1Q9UJ83 578 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 PLAGL1Q9UM63 463 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.66□□□□□ -1.826e-11■□□□□ 9
TRIM4-205ENST00000496896 SMAD5-AS1Q9Y6J3 95 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 ZMYM6O95789 1325 aa3.66□□□□□ -1.82
TRIM4-205ENST00000496896 COL22A1Q8NFW1 1626 aaPredicted RBP3.66□□□□□ -1.82
TRIM4-205ENST00000496896 AFDNP55196 1824 aaKnown RBP3.65□□□□□ -1.82
TRIM4-205ENST00000496896 LAMA4Q16363 1823 aa3.65□□□□□ -1.82
TRIM4-205ENST00000496896 PKD1L3Q7Z443 1732 aa3.65□□□□□ -1.82
TRIM4-205ENST00000496896 ATRNO75882 1429 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 A0A0D9SFI3 127 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 MSGN1A6NI15 193 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 CCDC69A6NI79 296 aa3.65□□□□□ -1.83
TRIM4-205ENST00000496896 AGAP14A8MT82 685 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms