RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 NKG7Q16617 165 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 GAB4Q2WGN9 574 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 CYBRD1Q53TN4 286 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 FAM78AQ5JUQ0 283 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ACSM2BQ68CK6 577 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 RAET1GQ6H3X3 334 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ADGRD2Q7Z7M1 963 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 TRIM74Q86UV6 250 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 NPAS3Q8IXF0 933 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF786Q8N393 782 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 C12orf76Q8N812 135 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 STARD8Q92502 1023 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 REXO5Q96IC2 774 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 MTERF1Q99551 399 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 REXO4Q9GZR2 422 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 MAGIXQ9H6Y5 334 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 VCX3AQ9NNX9 186 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 DNAJB9Q9UBS3 223 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 CCDC160A6NGH7 325 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 LILRB5O75023 590 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 CREG1O75629 220 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 MYO1DO94832 1006 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 SNAP29O95721 258 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 HPRP00739 348 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ADRB3P13945 408 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 HOXB6P17509 224 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 GPR1P46091 355 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 TRPC1P48995 793 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 CCR3P51677 355 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 PNLIPRP1P54315 467 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 C21orf58P58505 322 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 GTF2H3Q13889 308 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 DAG1Q14118 895 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 PON2Q15165 354 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 UGT8Q16880 541 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 DUOXA1Q1HG43 343 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ABRAXAS1Q6UWZ7 409 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 TMC5Q6UXY8 1006 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 PATL1Q86TB9 770 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 TRAPPC5Q8IUR0 188 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 SDCCAG3Q96C92 435 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 OR2AG1Q9H205 316 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 DCAF13Q9NV06 445 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 FAM120CQ9NX05 1096 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 PTTG2Q9NZH5 202 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 GULP1Q9UBP9 304 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 PCDHGA11Q9Y5H2 935 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 H0YAE9 185 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 K7ESM1 405 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 PRKD3O94806 890 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 BMP10O95393 424 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 C1orf105O95561 183 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 CST1P01037 141 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 ALBP02768 609 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 COX7A2P14406 83 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 IL1RNP18510 177 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 ALDH3B2P48448 385 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 TBPL1P62380 186 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 ADARB1P78563 741 aaKnown RBP12.62□□□□□ -0.39
GARNL3-220ENST00000496711 E2F2Q14209 437 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF234Q14588 700 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 CWF19L1Q69YN2 538 aaKnown RBP12.62□□□□□ -0.39
GARNL3-220ENST00000496711 USP51Q70EK9 711 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 UBE2Q1Q7Z7E8 422 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 OFCC1Q8IZS5 231 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 OR7A2PQ8NGA2 310 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 ZFP28Q8NHY6 868 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 SMARCD2Q92925 531 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 NMD3Q96D46 503 aaKnown RBP12.62□□□□□ -0.39
GARNL3-220ENST00000496711 DYRK4Q9NR20 520 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 THG1LQ9NWX6 298 aaKnown RBP12.62□□□□□ -0.39
GARNL3-220ENST00000496711 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 KCNE2Q9Y6J6 123 aa12.62□□□□□ -0.39
GARNL3-220ENST00000496711 A0A087WXM4 84 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 OTOL1A6NHN0 477 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 HEPACAM2A8MVW5 462 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 EVPLLA8MZ36 301 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 PLK4O00444 970 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 FPGTO14772 594 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 LZTS3O60299 673 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SEC24DO94855 1032 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 CLIC3O95833 236 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SERPINA1P01009 418 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ALPLP05186 524 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 DPTQ07507 201 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 GPM6BQ13491 265 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SPIN4Q56A73 249 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 CAPN13Q6MZZ7 669 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-220ENST00000496711 DOK6Q6PKX4 331 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 TMPRSS11BQ86T26 416 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 SERPINA11Q86U17 422 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 STK32CQ86UX6 486 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 ZDHHC13Q8IUH4 622 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 CFAP206Q8IYR0 622 aa12.61□□□□□ -0.39
GARNL3-220ENST00000496711 C7orf61Q8IZ16 206 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms