RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SUSD1Q6UWL2 747 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 COX15Q7KZN9 410 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 OVCH1Q7RTY7 1134 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 PPP1R32Q7Z5V6 425 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 MVB12AQ96EY5 273 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 NDNQ99608 321 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 P4HTMQ9NXG6 502 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 ZC3H7BQ9UGR2 993 aaKnown RBP15.03■□□□□ -0
HDAC4-213ENST00000496347 PYCARDQ9ULZ3 195 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 CNTRLQ7Z7A1 2325 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 DOPEY2Q9Y3R5 2298 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 ALPPP05187 535 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 MMP11P24347 488 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 IMPA1P29218 277 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 ARL4CP56559 192 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 TSTA3Q13630 321 aaPredicted RBP15.02■□□□□ -0
HDAC4-213ENST00000496347 NKG7Q16617 165 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 PRTGQ2VWP7 1150 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 UBE2R2Q712K3 238 aaPredicted RBP15.02■□□□□ -0
HDAC4-213ENST00000496347 PAQR7Q86WK9 346 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 CSNK1A1LQ8N752 337 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 FDCSPQ8NFU4 85 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 RERGQ96A58 199 aaPredicted RBP15.02■□□□□ -0
HDAC4-213ENST00000496347 C10orf90Q96M02 699 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 SPSB2Q99619 263 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 SMAD5Q99717 465 aaKnown RBP15.02■□□□□ -0
HDAC4-213ENST00000496347 WDR83Q9BRX9 315 aaKnown RBP15.02■□□□□ -0
HDAC4-213ENST00000496347 TRIM51Q9BSJ1 452 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 PCBD2Q9H0N5 130 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 CCDC177Q9NQR7 707 aaPredicted RBP15.02■□□□□ -0
HDAC4-213ENST00000496347 CTSFQ9UBX1 484 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 CHMP2BQ9UQN3 213 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 TEX264Q9Y6I9 313 aa15.02■□□□□ -0
HDAC4-213ENST00000496347 DOCK10Q96BY6 2186 aa15.02□□□□□ -0.01
HDAC4-213ENST00000496347 SPTBN1Q01082 2364 aaKnown RBP15.02□□□□□ -0.01
HDAC4-213ENST00000496347 LOC105369274A0A096LPK9 316 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 LOC102723532A0A0G2JNH3 316 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 AGPSO00116 658 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 TXNDC9O14530 226 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 SLC16A5O15375 505 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 TTI1O43156 1089 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 PRPF4O43172 522 aaKnown RBP eCLIP15.01□□□□□ -0.01
HDAC4-213ENST00000496347 DPM1O60762 260 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 ZIC2O95409 532 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-213ENST00000496347 HRH2P25021 359 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 GABRB3P28472 473 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 ELK3P41970 407 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 ITGA8P53708 1063 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 TBPL1P62380 186 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 CYHR1Q6ZMK1 362 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 IGDCC3Q8IVU1 814 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 PALM2Q8IXS6 379 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 LRRC56Q8IYG6 542 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-213ENST00000496347 OR4N4Q8N0Y3 316 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 MYO1HQ8N1T3 1032 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 PPFIBP2Q8ND30 876 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 MCOLN3Q8TDD5 553 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 CFAP36Q96G28 342 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 VPS50Q96JG6 964 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 NUDT9Q9BW91 350 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 PLAC1Q9HBJ0 212 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 PPANQ9NQ55 473 aaKnown RBP15.01□□□□□ -0.01
HDAC4-213ENST00000496347 C5AR2Q9P296 337 aa15.01□□□□□ -0.01
HDAC4-213ENST00000496347 STOX2Q9P2F5 926 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-213ENST00000496347 SHANK1Q9Y566 2161 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 VSTM2BA6NLU5 285 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 H0YGG7 62 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 FANCGO15287 622 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 IPO13O94829 963 aaKnown RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 SORBS2O94875 1100 aaKnown RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 EIF2S1P05198 315 aaKnown RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 CCND1P24385 295 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 CDKN2DP55273 166 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 ARF3P61204 181 aaPredicted RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 YBX1P67809 324 aaKnown RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 TIAL1Q01085 375 aaKnown RBP eCLIP15□□□□□ -0.01
HDAC4-213ENST00000496347 DSG2Q14126 1118 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 MYBPC3Q14896 1274 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 RBM20Q5T481 1227 aaKnown RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 TEDDM1Q5T9Z0 273 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 THEMIS2Q5TEJ8 643 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 GARNL3Q5VVW2 1013 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 PRAMEF13Q5VWM6 474 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 MIB2Q96AX9 1013 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 LINGO1Q96FE5 620 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 CABS1Q96KC9 395 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 CCDC138Q96M89 665 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 OR2A5Q96R48 311 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 PARVBQ9HBI1 364 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 SEMA3GQ9NS98 782 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 ZNF282Q9UDV7 671 aaPredicted RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 CDC23Q9UJX2 597 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 FBXL4Q9UKA2 621 aa15□□□□□ -0.01
HDAC4-213ENST00000496347 USP9YO00507 2555 aaPredicted RBP15□□□□□ -0.01
HDAC4-213ENST00000496347 IGLV3-12A0A075B6K2 115 aa14.99□□□□□ -0.01
HDAC4-213ENST00000496347 PABPN1LA6NDY0 278 aaKnown RBP14.99□□□□□ -0.01
HDAC4-213ENST00000496347 EFCAB8A8MWE9 144 aa14.99□□□□□ -0.01
HDAC4-213ENST00000496347 E7ESA3 106 aa14.99□□□□□ -0.01
HDAC4-213ENST00000496347 TP73O15350 636 aa14.99□□□□□ -0.01
HDAC4-213ENST00000496347 TSPAN12O95859 305 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms