RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ARNTP27540 789 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 ATP5DP30049 168 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 RPA3P35244 121 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 KCNJ1P48048 391 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 ARF3P61204 181 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 ARG2P78540 354 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 GBX1Q14549 363 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 TYSND1Q2T9J0 566 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 ANKRD20A4Q4UJ75 823 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 RNF187Q5TA31 235 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 ATG9BQ674R7 924 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 FBXO42Q6P3S6 717 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 DRICH1Q6PGQ1 229 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 SUSD1Q6UWL2 747 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 C4orf22Q6V702 233 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 KBTBD2Q8IY47 623 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 CATSPER1Q8NEC5 780 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 OR1N1Q8NGS0 311 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 OR9A1PQ8NGU1 263 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 LPGAT1Q92604 370 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 C10orf90Q96M02 699 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 SLX1AQ9BQ83 275 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 KIFC1Q9BW19 673 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 YIPF2Q9BWQ6 316 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 MRPS30Q9NP92 439 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 LZTFL1Q9NQ48 299 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 OLAHQ9NV23 265 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 PTGFRNQ9P2B2 879 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 TRPC4Q9UBN4 977 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 CDC14AQ9UNH5 594 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 CRYL1Q9Y2S2 319 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 CREBBPQ92793 2442 aa9.78□□□□□ -0.84
NUDCD3-210ENST00000493613 CSMD1Q96PZ7 3565 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 TCRBV7S3A2A0A539 114 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 DYTNA2CJ06 578 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 ARHGEF33A8MVX0 844 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 IDSB3KWA1 339 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 E5RI56 91 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 H3BMM5 538 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 FFAR3O14843 346 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 GPR42O15529 346 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 PRPF4O43172 522 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 PHF2O75151 1096 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 AVILO75366 819 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 USP1O94782 785 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 ESR1P03372 595 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 UQCRHP07919 91 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 PRR35P0CG20 571 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 ERGP11308 486 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 COX6A1P12074 109 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 VPS41P49754 854 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 EMP2P54851 167 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 EMP3P54852 163 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 TSTA3Q13630 321 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 DSG2Q14126 1118 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 TRIP13Q15645 432 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 ZRSR2Q15696 482 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 HKDC1Q2TB90 917 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 PRTGQ2VWP7 1150 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 KLHL38Q2WGJ6 581 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 FAAH2Q6GMR7 532 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 RPUSD3Q6P087 351 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 LRRC8BQ6P9F7 803 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 NDUFAF7Q7L592 441 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 TICAM1Q8IUC6 712 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 SLC34A3Q8N130 599 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 SIRT6Q8N6T7 355 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 BCORP1Q8N888 145 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 BRIX1Q8TDN6 353 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 SMPDL3AQ92484 453 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 MVB12AQ96EY5 273 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 MMABQ96EY8 250 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 MAGEB10Q96LZ2 347 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 TCF12Q99081 682 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 FAM114A2Q9NRY5 505 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 GALPQ9UBC7 116 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 SOX13Q9UN79 622 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 RUVBL1Q9Y265 456 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 ZKSCAN5Q9Y2L8 839 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 MYO7BQ6PIF6 2116 aa9.77□□□□□ -0.85
NUDCD3-210ENST00000493613 OTOGQ6ZRI0 2925 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 CSMD2Q7Z408 3487 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 IGHV1-45A0A0A0MS14 117 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 IGKV1-8A0A0C4DH67 115 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 A0A1B0GUH1 482 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 MYO1CO00159 1063 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 CEP104O60308 925 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 ZG16O60844 167 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 PSIP1O75475 530 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 JRKO75564 520 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 CATP04040 527 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 HEXBP07686 556 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 STSP08842 583 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 PKMP14618 531 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 EZRP15311 586 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 TPSB2P20231 275 aa9.76□□□□□ -0.85
NUDCD3-210ENST00000493613 OGNP20774 298 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms