RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 DZIP1Q86YF9 867 aaKnown RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 OR8H3Q8N146 312 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 NIPA2Q8N8Q9 360 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 GOT1L1Q8NHS2 421 aaPredicted RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 C9orf43Q8TAL5 461 aaPredicted RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 SUSD6Q92537 303 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 FAM162AQ96A26 154 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 PGM2Q96G03 612 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 SPATA33Q96N06 139 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 F2RL3Q96RI0 385 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 CCDC3Q9BQI4 270 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 KRTAP1-5Q9BYS1 174 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 MTMR12Q9C0I1 747 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 FAM49AQ9H0Q0 323 aaPredicted RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 TLE6Q9H808 572 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 GTF3C4Q9UKN8 822 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 KIF21BO75037 1637 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 MADDQ8WXG6 1647 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 TCF20Q9UGU0 1960 aaKnown RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 MAPKBP1O60336 1514 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 TOPBP1Q92547 1522 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 UNC80Q8N2C7 3258 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 NOTCH4Q99466 2003 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 A0A087WV48 116 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 A0A087WYN8 130 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 PRR23AA6NEV1 266 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 HHLA1C9JL84 531 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 FAM86B1E9PN63 330 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 KLF11O14901 512 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 LINC01565O15544 149 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 GRID2O43424 1007 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 EML2O95834 649 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 AMBPP02760 352 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 RPN1P04843 607 aaKnown RBP3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 FAM86B2P0C5J1 330 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 FAM58BPP0C7Q3 252 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 LHCGRP22888 699 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 WNT5AP41221 380 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 MAGEA11P43364 429 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 RGS7P49802 495 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 NAGLUP54802 743 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 SCN1BQ07699 218 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 RASGEF1BQ0VAM2 473 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 TRAP1Q12931 704 aaKnown RBP3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 BFSP1Q12934 665 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 SCARB2Q14108 478 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 PTGISQ16647 500 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 CTU2Q2VPK5 515 aaKnown RBP3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 ZNF876PQ49A33 203 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 FFAR4Q5NUL3 377 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 SHEQ5VZ18 495 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 FAM91A1Q658Y4 838 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 G2E3Q7L622 706 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 NRARPQ7Z6K4 114 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 GLRX5Q86SX6 157 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 AMIGO1Q86WK6 493 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 KLHDC8BQ8IXV7 354 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 TIGD4Q8IY51 512 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 SIX6OS1Q8N1H7 587 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 TMEM178AQ8NBL3 297 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 TRIM58Q8NG06 486 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 OR10Q1Q8NGQ4 319 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 OR4C3Q8NH37 302 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 HEXDCQ8WVB3 486 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 HPSE2Q8WWQ2 592 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 EXOC4Q96A65 974 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 ZNF501Q96CX3 271 aaPredicted RBP3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 CCDC114Q96M63 670 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 DUX3Q96PT4 197 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 INTS14Q96SY0 518 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 INPP5KQ9BT40 448 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 FSD1Q9BTV5 496 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 SHARPINQ9H0F6 387 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 C19orf25Q9UFG5 118 aaPredicted RBP3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 GRID1Q9ULK0 1009 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 R4GN57 208 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 ADAMTS7Q9UKP4 1686 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 LAMC3Q9Y6N6 1575 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 WDR90Q96KV7 1748 aa3.16□□□□□ -1.9
AC055855.1-201ENST00000489563 ABCA12Q86UK0 2595 aa3.15□□□□□ -1.9
AC055855.1-201ENST00000489563 PSMA7O14818 248 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 GLRA3O75311 464 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 CDC123O75794 336 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 PGLSO95336 258 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 NADKO95544 446 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 APOHP02749 345 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ZFYP08048 801 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 PATE4P0C8F1 98 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 FAM157CP0CG43 387 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 STAG3L1P0CL83 205 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 SPP1P10451 314 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ADRA2CP18825 462 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 EPORP19235 508 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 CD27P26842 260 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ALDH4A1P30038 563 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 TLX1P31314 330 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 CETN2P41208 172 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 CLDN15P56746 228 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 POU5F1Q01860 360 aaKnown RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 SP3Q02447 781 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms