RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 PAQR7Q86WK9 346 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 ZBED8Q8IZ13 594 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 MVB12AQ96EY5 273 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 HIST1H2AHQ96KK5 128 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 HIST1H2AJQ99878 128 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 H2AFJQ9BTM1 129 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 RAB17Q9H0T7 212 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 MLXIPLQ9NP71 852 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 SLC6A20Q9NP91 592 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 ACSS2Q9NR19 701 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 PCDHGB7Q9Y5F8 929 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 BAHCC1Q9P281 2608 aa18.18■□□□□ 0.5
MRPL55-230ENST00000489430 IGKV1-8A0A0C4DH67 115 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 HYKKA2RU49 373 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 RAD51CO43502 376 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 CEACAM4O75871 244 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 TSPAN12O95859 305 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 VSX2P58304 361 aaPredicted RBP18.17■□□□□ 0.5
MRPL55-230ENST00000489430 MUM1Q2TAK8 710 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 PRTGQ2VWP7 1150 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 GARNL3Q5VVW2 1013 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 PRICKLE2Q7Z3G6 844 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 HPS6Q86YV9 775 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 ANKMY2Q8IV38 441 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 GPATCH11Q8N954 259 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 PYROXD1Q8WU10 500 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 LINGO1Q96FE5 620 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 TRIM54Q9BYV2 358 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 CCDC177Q9NQR7 707 aaPredicted RBP18.17■□□□□ 0.5
MRPL55-230ENST00000489430 SLC22A11Q9NSA0 550 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 STOX2Q9P2F5 926 aaPredicted RBP18.17■□□□□ 0.5
MRPL55-230ENST00000489430 G3BP2Q9UN86 482 aaKnown RBP18.17■□□□□ 0.5
MRPL55-230ENST00000489430 PDE10AQ9Y233 779 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 PTRH2Q9Y3E5 179 aaKnown RBP18.17■□□□□ 0.5
MRPL55-230ENST00000489430 SPTBP11277 2137 aa18.17■□□□□ 0.5
MRPL55-230ENST00000489430 A0A0J9YVX5 310 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 ENO2P09104 434 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-230ENST00000489430 GSTA2P09210 222 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 CKAP4Q07065 602 aaKnown RBP18.16■□□□□ 0.5
MRPL55-230ENST00000489430 TSTA3Q13630 321 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-230ENST00000489430 FASTKD3Q14CZ7 662 aaKnown RBP18.16■□□□□ 0.5
MRPL55-230ENST00000489430 THEMIS2Q5TEJ8 643 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 FRMPD2BQ6IN97 320 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 ZC3HC1Q86WB0 502 aaKnown RBP18.16■□□□□ 0.5
MRPL55-230ENST00000489430 ATL1Q8WXF7 558 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 FER1L6-AS2Q96M78 137 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 OR2A5Q96R48 311 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 TRIM55Q9BYV6 548 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 FAM129AQ9BZQ8 928 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 ZNF71Q9NQZ8 489 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-230ENST00000489430 TMEM184CQ9NVA4 438 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 ADAMTS6Q9UKP5 1117 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 CDC14AQ9UNH5 594 aa18.16■□□□□ 0.5
MRPL55-230ENST00000489430 GCN1Q92616 2671 aaKnown RBP18.16■□□□□ 0.5
MRPL55-230ENST00000489430 KCNE1BA0A087WTH5 132 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 LOC105369274A0A096LPK9 316 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 LOC102723532A0A0G2JNH3 316 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 PABPN1LA6NDY0 278 aaKnown RBP18.15■□□□□ 0.5
MRPL55-230ENST00000489430 ARGFXA6NJG6 315 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 H0YGG7 62 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 PEX12O00623 359 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 KLHL41O60662 606 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 ITGAXP20702 1163 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 CASRP41180 1078 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 ARF3P61204 181 aaPredicted RBP18.15■□□□□ 0.5
MRPL55-230ENST00000489430 YBX1P67809 324 aaKnown RBP18.15■□□□□ 0.5
MRPL55-230ENST00000489430 KLRB1Q12918 225 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 AGTRAPQ6RW13 159 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 STRA8Q7Z7C7 330 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 MRGPREQ86SM8 312 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 OR4N4Q8N0Y3 316 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 C17orf53Q8N3J3 647 aaPredicted RBP18.15■□□□□ 0.5
MRPL55-230ENST00000489430 NKAPQ8N5F7 415 aaKnown RBP18.15■□□□□ 0.5
MRPL55-230ENST00000489430 PPFIBP2Q8ND30 876 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 CDKL2Q92772 493 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 RERGQ96A58 199 aaPredicted RBP18.15■□□□□ 0.5
MRPL55-230ENST00000489430 THAP11Q96EK4 314 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 VPS39Q96JC1 886 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 MCMBPQ9BTE3 642 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 SLC25A23Q9BV35 468 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 RHOJQ9H4E5 214 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 POPDC3Q9HBV1 291 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 GRHL1Q9NZI5 618 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 SLC17A6Q9P2U8 582 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 NOVA2Q9UNW9 492 aaKnown RBP18.15■□□□□ 0.5
MRPL55-230ENST00000489430 TP53TG5Q9Y2B4 290 aa18.15■□□□□ 0.5
MRPL55-230ENST00000489430 PRPF4O43172 522 aaKnown RBP eCLIP18.14■□□□□ 0.49
MRPL55-230ENST00000489430 ZNF37AP17032 561 aaPredicted RBP18.14■□□□□ 0.49
MRPL55-230ENST00000489430 MMP11P24347 488 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 TBPL1P62380 186 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 C2orf54Q08AI8 447 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 NKG7Q16617 165 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 PRAMEF13Q5VWM6 474 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 ASB18Q6ZVZ8 466 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 CSNK1A1LQ8N752 337 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 VPS50Q96JG6 964 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 OLFM1Q99784 485 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 HAUS8Q9BT25 410 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 SGPP1Q9BX95 441 aa18.14■□□□□ 0.49
MRPL55-230ENST00000489430 DPH5Q9H2P9 285 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms