RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PRAMEF26H0Y7S4 382 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 SNRPB2P08579 225 aaKnown RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 ADRB1P08588 477 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 IDSP22304 550 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PGM1P36871 562 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 HNF4AP41235 474 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 CASP2P42575 452 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 GNPDA1P46926 289 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 TAP2Q03519 686 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 MAD2L1Q13257 205 aaPredicted RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 E2F2Q14209 437 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 RPS6KA2Q15349 733 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 CPSF6Q16630 551 aaKnown RBP eCLIP12.29□□□□□ -0.44
NELFE-209ENST00000488426 IMPG1Q17R60 797 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PDCD4Q53EL6 469 aaKnown RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 GRHL2Q6ISB3 625 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 CYB5D1Q6P9G0 228 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 LAYNQ6UX15 382 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 FNDC5Q8NAU1 212 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 TMEM145Q8NBT3 493 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 OR5AR1Q8NGP9 310 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 SETD7Q8WTS6 366 aaKnown RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 SLC25A23Q9BV35 468 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 OSGEPL1Q9H4B0 414 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 ELOVL6Q9H5J4 265 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 EFCAB1Q9HAE3 211 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 EBF2Q9HAK2 575 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 CCDC177Q9NQR7 707 aaPredicted RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 CCDC167Q9P0B6 97 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 MOSPD1Q9UJG1 213 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PSMD13Q9UNM6 376 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 EPG5Q9HCE0 2579 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 NPIPB8E9PQR5 432 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PRAMEF4O60810 478 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 IGHV4-34P06331 123 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 ITGAXP20702 1163 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 NUDT2P50583 147 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 CTBSQ01459 385 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 LRP8Q14114 963 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 AP5B1Q2VPB7 878 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 C11orf91Q3C1V1 193 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 XKR6Q5GH73 641 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PRAMEF9Q5VWM5 478 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 FRG2Q64ET8 278 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 ENPP7Q6UWV6 458 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 C16orf89Q6UX73 402 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 GK5Q6ZS86 529 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 ABI3BPQ7Z7G0 1075 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PARP9Q8IXQ6 854 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 LRRC56Q8IYG6 542 aaPredicted RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 KYQ8NBH2 561 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PPFIBP2Q8ND30 876 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 TSPEARQ8WU66 669 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 SELENOMQ8WWX9 145 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 OR1E3Q8WZA6 343 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 BIRC7Q96CA5 298 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 FRG2BQ96QU4 278 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 ORAI3Q9BRQ5 295 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 IL21RQ9HBE5 538 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 MRPL40Q9NQ50 206 aaKnown RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 FARSBQ9NSD9 589 aaKnown RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 NOP53Q9NZM5 478 aaKnown RBP12.29□□□□□ -0.44
NELFE-209ENST00000488426 CIDEBQ9UHD4 219 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 KCNK6Q9Y257 313 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 DYRK1BQ9Y463 629 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 AKAP13Q12802 2813 aa12.29□□□□□ -0.44
NELFE-209ENST00000488426 CELSR3Q9NYQ7 3312 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 E7EQ34 232 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 H0Y8X5 98 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 H0YIV9 168 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 MGRN1O60291 552 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 RSL1D1O76021 490 aaKnown RBP12.28□□□□□ -0.44
NELFE-209ENST00000488426 PCSK2P16519 638 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 PRPH2P23942 346 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 RABIFP47224 123 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 RAP1GDS1P52306 607 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 THOP1P52888 689 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 DIO3P55073 304 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 SLC25A3Q00325 362 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 RIPK1Q13546 671 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 DOC2AQ14183 400 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 CYP2A13Q16696 494 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 C10orf62Q5T681 223 aaPredicted RBP12.28□□□□□ -0.44
NELFE-209ENST00000488426 RAB42Q8N4Z0 105 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 MINDY1Q8N5J2 469 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 FAM13CQ8NE31 585 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 DEFB124Q8NES8 71 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 CADM4Q8NFZ8 388 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 RCN3Q96D15 328 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 WDR34Q96EX3 536 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 C12orf66Q96MD2 445 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 HBEGFQ99075 208 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 MRPL1Q9BYD6 325 aaKnown RBP12.28□□□□□ -0.44
NELFE-209ENST00000488426 EHD1Q9H4M9 534 aa12.28□□□□□ -0.44
NELFE-209ENST00000488426 ASIC5Q9NY37 505 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms