RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MTAPQ13126 283 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 PWP1Q13610 501 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 NFYCQ13952 458 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 FLOT2Q14254 428 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 RCN1Q15293 331 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 CCDC6Q16204 474 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 FXNQ16595 210 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 NOXRED1Q6NXP6 359 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SUSD1Q6UWL2 747 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 CHST15Q7LFX5 561 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 TMPRSS11BQ86T26 416 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 C17orf64Q86WR6 236 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 HID1Q8IV36 788 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 RIMKLAQ8IXN7 391 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SLC15A3Q8IY34 581 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 OR4K1Q8NGD4 311 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 OR8J3Q8NGG0 315 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 OR2L8Q8NGY9 312 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 CHTF18Q8WVB6 975 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SLC13A3Q8WWT9 602 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 POP5Q969H6 163 aaKnown RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 CXorf40BQ96DE9 158 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 TMEM74Q96NL1 305 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 CAMK1GQ96NX5 476 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 HBEGFQ99075 208 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SH3GL1Q99961 368 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 RHBGQ9H310 441 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 FGF22Q9HCT0 170 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 GEMIN8Q9NWZ8 242 aaKnown RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 WSB2Q9NYS7 404 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 ADA2Q9NZK5 511 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 NKX1-2Q9UD57 310 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 PRKAB1Q9Y478 270 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 PCDHA9Q9Y5H5 950 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 DGKBQ9Y6T7 804 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 COLEC10Q9Y6Z7 277 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 PRR23AA6NEV1 266 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 PRORSD1PA6NEY8 169 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 POM121BA6NF01 834 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 AQP12BA6NM10 295 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 ERN1O75460 977 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 SEMA3DO95025 777 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 PGRP06401 933 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 C8BP07358 591 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 ANPEPP15144 967 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 XRCC1P18887 633 aaPredicted RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 PKLRP30613 574 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 MAT2AP31153 395 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 GSTM5P46439 218 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 NEK2P51955 445 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 SLC7A2P52569 658 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 NME5P56597 212 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 ACSM2AQ08AH3 577 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 SLBPQ14493 270 aaKnown RBP eCLIP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 CMPK2Q5EBM0 449 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 PAGE3Q5JUK9 113 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 ACSM2BQ68CK6 577 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 DLEU7Q6UYE1 221 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 GCNT7Q6ZNI0 430 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 CAMKMTQ7Z624 323 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 PTRH1Q86Y79 214 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 DCP2Q8IU60 420 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 AQP12AQ8IXF9 295 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 PPFIBP2Q8ND30 876 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 HUS1BQ8NHY5 278 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 CCDC124Q96CT7 223 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 MTFMTQ96DP5 389 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 APIPQ96GX9 242 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 C12orf66Q96MD2 445 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 FERD3LQ96RJ6 166 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 AIF1LQ9BQI0 150 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 SARGQ9BW04 601 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 TRIM15Q9C019 465 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 TWSG1Q9GZX9 223 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 RMND5AQ9H871 391 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 CARS2Q9HA77 564 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 LMAN1LQ9HAT1 526 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 LTB4R2Q9NPC1 389 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 GPR27Q9NS67 375 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 TM7SF3Q9NS93 570 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 BRWD1Q9NSI6 2320 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 NDRG2Q9UN36 371 aaKnown RBP11.22□□□□□ -0.61
PRKCB-207ENST00000486868 PSMD13Q9UNM6 376 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 WDR37Q9Y2I8 494 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 L3MBTL1Q9Y468 752 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 GPSM3Q9Y4H4 160 aa11.22□□□□□ -0.61
PRKCB-207ENST00000486868 A0A1W2PPV9 198 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 PIPSLA2A3N6 862 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 KRT87PA6NCN2 255 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 MAGEB17A8MXT2 336 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 MAP3K7O43318 606 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 KCNH1O95259 989 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 CCNDBP1O95273 360 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 FKBP9O95302 570 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms