RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 MID1IP1Q9NPA3 183 aa4.5□□□□□ -1.69
LMBR1-218ENST00000486837 GKN1Q9NS71 199 aa4.5□□□□□ -1.69
LMBR1-218ENST00000486837 DDX43Q9NXZ2 648 aaKnown RBP4.5□□□□□ -1.69
LMBR1-218ENST00000486837 ZDHHC2Q9UIJ5 367 aa4.5□□□□□ -1.69
LMBR1-218ENST00000486837 CPSF3Q9UKF6 684 aaKnown RBP4.5□□□□□ -1.69
LMBR1-218ENST00000486837 ITM2BQ9Y287 266 aa4.5□□□□□ -1.69
LMBR1-218ENST00000486837 TRIM17Q9Y577 477 aa4.5□□□□□ -1.69
LMBR1-218ENST00000486837 PCDH11YQ9BZA8 1340 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 ARHGEF37A1IGU5 675 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 FAM72CH0Y354 149 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 NDC80O14777 642 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 PRKRAO75569 313 aaKnown RBP4.49□□□□□ -1.69
LMBR1-218ENST00000486837 STAM2O75886 525 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 NEBLO76041 1014 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 GCFC2P16383 781 aaKnown RBP4.49□□□□□ -1.69
LMBR1-218ENST00000486837 MPZP25189 248 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 TIMP3P35625 211 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 CCR10P46092 362 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 LHX1P48742 406 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 MAPK12P53778 367 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 CDH11P55287 796 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 NUCB2P80303 420 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 FAM72AQ5TYM5 149 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 FAM72DQ6L9T8 149 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 CCDC80Q76M96 950 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 CUZD1Q86UP6 607 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 FAM72BQ86X60 149 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 SIX6OS1Q8N1H7 587 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 ZNF611Q8N823 705 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 LRRC8CQ8TDW0 803 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 TCP11Q8WWU5 503 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 PSD2Q9BQI7 771 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 RHNO1Q9BSD3 238 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 BICC1Q9H694 974 aaKnown RBP4.49□□□□□ -1.69
LMBR1-218ENST00000486837 QPCTLQ9NXS2 382 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 AKAP7Q9P0M2 348 aaPredicted RBP4.49□□□□□ -1.69
LMBR1-218ENST00000486837 TBC1D7Q9P0N9 293 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 RABL2AQ9UBK7 228 aaPredicted RBP4.49□□□□□ -1.69
LMBR1-218ENST00000486837 CACNG4Q9UBN1 327 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 CLIP2Q9UDT6 1046 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 LIPGQ9Y5X9 500 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 SMCHD1A6NHR9 2005 aa4.49□□□□□ -1.69
LMBR1-218ENST00000486837 BRD4O60885 1362 aaPredicted RBP4.49□□□□□ -1.69
LMBR1-218ENST00000486837 KRT87PA6NCN2 255 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 TMEM110-MUSTN1A8MSY1 372 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 RTN2O75298 545 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 SEC22BO75396 215 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 E2F6O75461 281 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 UMODP07911 640 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 OR52Z1P0C646 297 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 SAGP10523 405 aaPredicted RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 HSPA8P11142 646 aaKnown RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 EFNA1P20827 205 aaPredicted RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 HSPA4P34932 840 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 POLR2LP62875 67 aaKnown RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 SCN1BQ07699 218 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 DMPKQ09013 629 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 PPIGQ13427 754 aaKnown RBP eCLIP4.48□□□□□ -1.692e-6■■□□□ 14.2
LMBR1-218ENST00000486837 CUL3Q13618 768 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 ITGA7Q13683 1181 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 TAF13Q15543 124 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 NHSL2Q5HYW2 709 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 C9orf50Q5SZB4 431 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 MARK2Q7KZI7 788 aaKnown RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 TRPT1Q86TN4 253 aaKnown RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 STPG4Q8N801 248 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 FIBINQ8TAL6 211 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 SPSB1Q96BD6 273 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 NSL1Q96IY1 281 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 C16orf45Q96MC5 204 aaPredicted RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 CPNE1Q99829 537 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 FAM129AQ9BZQ8 928 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 TRIM6Q9C030 488 aaPredicted RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 MIS12Q9H081 205 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 CHMP5Q9NZZ3 219 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 TCF19Q9Y242 345 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 RRP15Q9Y3B9 282 aaKnown RBP4.48□□□□□ -1.69
LMBR1-218ENST00000486837 N6AMT1Q9Y5N5 214 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 ATAD2BQ9ULI0 1458 aa4.48□□□□□ -1.69
LMBR1-218ENST00000486837 LOC101059948A0A1B0GTJ6 334 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 LRRD1A4D1F6 860 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 A4D1N5 150 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 DUXAA6NLW8 204 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 CLIC2O15247 247 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 TXNL1O43396 289 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 PRPSAP2O60256 369 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 ERLIN1O75477 346 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 PNPP00491 289 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 SMIM18P0DKX4 95 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 HAPLN1P10915 354 aaPredicted RBP4.47□□□□□ -1.69
LMBR1-218ENST00000486837 CD22P20273 847 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 PTPN3P26045 913 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 PTGER4P35408 488 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 YBEYP58557 167 aaPredicted RBP4.47□□□□□ -1.69
LMBR1-218ENST00000486837 RPA4Q13156 261 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 PTK6Q13882 451 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 ZNF273Q14593 569 aa4.47□□□□□ -1.69
LMBR1-218ENST00000486837 CLPPQ16740 277 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms