RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 HEMK1Q9Y5R4 338 aaPredicted RBP6.71□□□□□ -1.34
VPS50-218ENST00000485994 ESPL1Q14674 2120 aa6.71□□□□□ -1.34
VPS50-218ENST00000485994 IGLV3-12A0A075B6K2 115 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 A0A1B0GX78 115 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 VSTM2BA6NLU5 285 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 EFCAB8A8MWE9 144 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 TXNDC9O14530 226 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 PCDH17O14917 1159 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 FANCGO15287 622 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 TTI1O43156 1089 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 SLC16A8O95907 504 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 C8GP07360 202 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 CTSBP07858 339 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 GSTA2P09210 222 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ERVK-10P10266 1014 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 CCND1P24385 295 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ELK3P41970 407 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 BDKRB1P46663 353 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 CARSP49589 748 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 CSRP3P50461 194 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ITGA8P53708 1063 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 KLRB1Q12918 225 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 SP140Q13342 867 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 IL10RAQ13651 578 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 FAM53BQ14153 422 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 FASTKQ14296 549 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 HIF1AQ16665 826 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 KCTD19Q17RG1 926 aaPredicted RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 PRTGQ2VWP7 1150 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 BBS9Q3SYG4 887 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 LACTB2Q53H82 288 aaPredicted RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 WASHC2DQ5SRD0 308 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ICE2Q659A1 982 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ZNF425Q6IV72 752 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 PRMT9Q6P2P2 845 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 SLC26A11Q86WA9 606 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 PAQR7Q86WK9 346 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 RAB43Q86YS6 212 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 KLHL7Q8IXQ5 586 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 C2orf73Q8N5S3 287 aaPredicted RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 SPATA4Q8NEY3 305 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ZNF480Q8WV37 535 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 EEF1AKMT1Q8WVE0 214 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 FER1L6-AS2Q96M78 137 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 OR2A5Q96R48 311 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 SMAD5Q99717 465 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 MIPEPQ99797 713 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ZFYVE21Q9BQ24 234 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 MCMBPQ9BTE3 642 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 DPH7Q9BTV6 452 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 ING2Q9H160 280 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 MRPS30Q9NP92 439 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 SLC22A11Q9NSA0 550 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 CUTCQ9NTM9 273 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 TMEM184CQ9NVA4 438 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 NSMCE4AQ9NXX6 385 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 IFT80Q9P2H3 777 aaPredicted RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 DHCR7Q9UBM7 475 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 ZC3H7BQ9UGR2 993 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 NXT1Q9UKK6 140 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 NOVA2Q9UNW9 492 aaKnown RBP6.7□□□□□ -1.34
VPS50-218ENST00000485994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS50-218ENST00000485994 SCN2AQ99250 2005 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 POLEQ07864 2286 aa6.7□□□□□ -1.34
VPS50-218ENST00000485994 TNRC6AQ8NDV7 1962 aaKnown RBP6.69□□□□□ -1.34
VPS50-218ENST00000485994 SCN3AQ9NY46 2000 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 IGKV1-8A0A0C4DH67 115 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 HYKKA2RU49 373 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 SLC28A2O43868 658 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 CNOT3O75175 753 aaKnown RBP6.69□□□□□ -1.34
VPS50-218ENST00000485994 WISP1O95388 367 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 TSPAN12O95859 305 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 TUBB4AP04350 444 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 EZRP15311 586 aaKnown RBP6.69□□□□□ -1.34
VPS50-218ENST00000485994 CD46P15529 392 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 ITGAXP20702 1163 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 ALAS2P22557 587 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 MMP11P24347 488 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 IMPA1P29218 277 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 CASQ1P31415 396 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 RPA3P35244 121 aaPredicted RBP6.69□□□□□ -1.34
VPS50-218ENST00000485994 AP1S2P56377 157 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 IL2P60568 153 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 RPS18P62269 152 aaKnown RBP6.69□□□□□ -1.34
VPS50-218ENST00000485994 MPP1Q00013 466 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 CAV1Q03135 178 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 MGAT5Q09328 741 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 MUM1Q2TAK8 710 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 PTCHD3Q3KNS1 767 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 MLIPQ5VWP3 458 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 DUPD1Q68J44 220 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 FRMPD2BQ6IN97 320 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 FAM45BPQ6NSW5 357 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 PAQR3Q6TCH7 311 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 SUSD1Q6UWL2 747 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 IGFL3Q6UXB1 125 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 TTLL10Q6ZVT0 673 aa6.69□□□□□ -1.34
VPS50-218ENST00000485994 UBE2R2Q712K3 238 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms