RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CATSPERBQ9H7T0 1116 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 SIRT5Q9NXA8 310 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 THUMPD1Q9NXG2 353 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 GPR83Q9NYM4 423 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 SLC23A1Q9UHI7 598 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 RIMKLBQ9ULI2 386 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 ZNF490Q9ULM2 529 aaPredicted RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 RWDD3Q9Y3V2 267 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 CCL27Q9Y4X3 112 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 COL4A4P53420 1690 aaPredicted RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 CDC7O00311 574 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 RHOBTB1O94844 696 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 ZNF682O95780 498 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 HLA-DQB1P01920 261 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 HOXB9P17482 250 aaPredicted RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 AZGP1P25311 298 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 RPS19P39019 145 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 TSTQ16762 297 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 TATDN3Q17R31 274 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 SETMARQ53H47 684 aaPredicted RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 SPANXN4Q5MJ08 99 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 SAXO2Q658L1 398 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 PLET1Q6UQ28 207 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 ZNF605Q86T29 641 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 KIF18BQ86Y91 864 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 LAX1Q8IWV1 398 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 TMEM132CQ8N3T6 1108 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 C9orf62Q8N4C0 152 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 DUSP18Q8NEJ0 188 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 NUDT8Q8WV74 236 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 ZBED3Q96IU2 234 aaPredicted RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 C8orf48Q96LL4 319 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 TBATAQ96M53 351 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 GPR137Q96N19 417 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 ZNF578Q96N58 590 aaPredicted RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 TM9SF2Q99805 663 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 MYOCQ99972 504 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 TSEN34Q9BSV6 310 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 SPATA9Q9BWV2 254 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 PRRG3Q9BZD7 231 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 MCOLN1Q9GZU1 580 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 CXCL16Q9H2A7 254 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 CNOT2Q9NZN8 540 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 FNIP2Q9P278 1114 aa10.35□□□□□ -0.75
SIK3-210ENST00000480468 EIF2B4Q9UI10 523 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 UBQLN1Q9UMX0 589 aaKnown RBP10.35□□□□□ -0.75
SIK3-210ENST00000480468 CCL22O00626 93 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 VIPP01282 170 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 POU3F3P20264 500 aaPredicted RBP10.34□□□□□ -0.75
SIK3-210ENST00000480468 ITGB7P26010 798 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 VLDLRP98155 873 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 RGS1Q08116 209 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 PTGR1Q14914 329 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 LY6KQ17RY6 165 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 GTDC1Q4AE62 458 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 FBXO48Q5FWF7 155 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 RAB41Q5JT25 222 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 ERICH5Q6P6B1 374 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 TMEM65Q6PI78 240 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 DDX53Q86TM3 631 aaKnown RBP10.34□□□□□ -0.75
SIK3-210ENST00000480468 TMC8Q8IU68 726 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.34□□□□□ -0.75
SIK3-210ENST00000480468 NLGN1Q8N2Q7 840 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 C1orf52Q8N6N3 182 aaKnown RBP10.34□□□□□ -0.75
SIK3-210ENST00000480468 OR52B6Q8NGF0 335 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 GPR152Q8TDT2 470 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 OR52E6Q96RD3 313 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 MED16Q9Y2X0 877 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 GBF1Q92538 1859 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 THSD7AQ9UPZ6 1657 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 NPEPPSL1A6NEC2 478 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 ZNF670-ZNF695F2Z2N8 137 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 CLDN5O00501 218 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 PLA2G10O15496 165 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 HCN1O60741 890 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 RPP40O75818 363 aaKnown RBP10.34□□□□□ -0.75
SIK3-210ENST00000480468 WDR47O94967 919 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 HSMCR30P0CW71 290 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 SLC2A4P14672 509 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 TNNI3P19429 210 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 CCR1P32246 355 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 CPT1AP50416 773 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 CRISP3P54108 245 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 PER3P56645 1201 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 RRAS2P62070 204 aaPredicted RBP10.34□□□□□ -0.75
SIK3-210ENST00000480468 SNRPD2P62316 118 aaKnown RBP10.34□□□□□ -0.75
SIK3-210ENST00000480468 SSX1Q16384 188 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 PDZK1Q5T2W1 519 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 MANEALQ5VSG8 457 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 PAMR1Q6UXH9 720 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 SERPINA11Q86U17 422 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 TRIM69Q86WT6 500 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 GPALPP1Q8IXQ4 340 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 C10orf111Q8N326 155 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 TOP6BLQ8N6T0 577 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 LPCAT1Q8NF37 534 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 NLGN4YQ8NFZ3 816 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms