RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CXorf40BQ96DE9 158 aa10.09□□□□□ -0.79
LINC00173-203ENST00000480237 MTFMTQ96DP5 389 aaKnown RBP10.09□□□□□ -0.79
LINC00173-203ENST00000480237 CAMK1GQ96NX5 476 aa10.09□□□□□ -0.79
LINC00173-203ENST00000480237 HAUS8Q9BT25 410 aa10.09□□□□□ -0.79
LINC00173-203ENST00000480237 C1orf50Q9BV19 199 aa10.09□□□□□ -0.79
LINC00173-203ENST00000480237 PCDHB11Q9Y5F2 797 aa10.09□□□□□ -0.79
LINC00173-203ENST00000480237 SLCO1B1Q9Y6L6 691 aa10.09□□□□□ -0.79
LINC00173-203ENST00000480237 COLEC10Q9Y6Z7 277 aa10.09□□□□□ -0.79
LINC00173-203ENST00000480237 NUP210LQ5VU65 1888 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 H0YHG0 523 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 PDYNP01213 254 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 COX4I1P13073 169 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 F3P13726 295 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 IDO1P14902 403 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 MAOBP27338 520 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 NDUFS1P28331 727 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 PTPN4P29074 926 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 PKLRP30613 574 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 ATP4BP51164 291 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 MNAT1P51948 309 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 RPL38P63173 70 aaKnown RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 RACK1P63244 317 aaKnown RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 DMWDQ09019 674 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 DDX39BQ13838 428 aaKnown RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 RPS6KA2Q15349 733 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 MAPRE2Q15555 327 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 CYP2A13Q16696 494 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 PAGE2BQ5JRK9 111 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 FRG2Q64ET8 278 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 OGFOD2Q6N063 350 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 LCTLQ6UWM7 567 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 ABRAXAS1Q6UWZ7 409 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 WASH2PQ6VEQ5 465 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 ARMCX6Q7L4S7 300 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 LPCAT2Q7L5N7 544 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 SNX32Q86XE0 403 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 TRIM48Q8IWZ4 208 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 LRRC56Q8IYG6 542 aaPredicted RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 TMEFF1Q8IYR6 380 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 KIF2BQ8N4N8 673 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 MFSD2AQ8NA29 543 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 SETD7Q8WTS6 366 aaKnown RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 USP7Q93009 1102 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 PPP3R2Q96LZ3 170 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 FRG2BQ96QU4 278 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 PCBD2Q9H0N5 130 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 LRMDAQ9H2I8 198 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 TCEAL2Q9H3H9 227 aaPredicted RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 WASH6PQ9NQA3 447 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 FARSBQ9NSD9 589 aaKnown RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 SCHIP1Q9P0W5 487 aaPredicted RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 APOBEC3BQ9UH17 382 aaKnown RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 TAC3Q9UHF0 121 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 SH2B3Q9UQQ2 575 aa10.08□□□□□ -0.8
LINC00173-203ENST00000480237 POLR3HQ9Y535 204 aaPredicted RBP10.08□□□□□ -0.8
LINC00173-203ENST00000480237 CFAP73A6NFT4 308 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
LINC00173-203ENST00000480237 LSM1O15116 133 aaKnown RBP10.07□□□□□ -0.8
LINC00173-203ENST00000480237 PRAMEF4O60810 478 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 WFS1O76024 890 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 EML2O95834 649 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 PRR35P0CG20 571 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 PCNAP12004 261 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 CDH1P12830 882 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 NPPBP16860 134 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 CD22P20273 847 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 FNTBP49356 437 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 NME5P56597 212 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 IRX1P78414 480 aaPredicted RBP10.07□□□□□ -0.8
LINC00173-203ENST00000480237 MAD2L1Q13257 205 aaPredicted RBP10.07□□□□□ -0.8
LINC00173-203ENST00000480237 CUL3Q13618 768 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 SLBPQ14493 270 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00173-203ENST00000480237 HERC3Q15034 1050 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 PLCL1Q15111 1095 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 GSTA3Q16772 222 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 AP5B1Q2VPB7 878 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 AGKQ53H12 422 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 PRAMEF9Q5VWM5 478 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 ATG9BQ674R7 924 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 TSSK4Q6SA08 328 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 GK5Q6ZS86 529 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 TAF8Q7Z7C8 310 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 IQCHQ86VS3 1027 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 C17orf64Q86WR6 236 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 MIER2Q8N344 545 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 SFRP1Q8N474 314 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 OR52E1Q8NGJ3 308 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 OR2L8Q8NGY9 312 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 EDAQ92838 391 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 REPS1Q96D71 796 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 MENTQ9BUN1 341 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 EFCAB11Q9BUY7 163 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 ACAT2Q9BWD1 397 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 XKR8Q9H6D3 395 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 KIR3DX1Q9H7L2 352 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 TM9SF3Q9HD45 589 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 AIG1Q9NVV5 245 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms