RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GGT5P36269 586 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 TBPL1P62380 186 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 RHDQ02161 417 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ZNF460Q14592 562 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 GRM7Q14831 915 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ZXDCQ2QGD7 858 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-217ENST00000479161 PRAMEF13Q5VWM6 474 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ZNF385CQ66K41 422 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-217ENST00000479161 FBXO42Q6P3S6 717 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 TAOK1Q7L7X3 1001 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 TAX1BP1Q86VP1 789 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 TCAIMQ8N3R3 496 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ABHD11Q8NFV4 315 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 CAB39LQ9H9S4 337 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 NMRAL1Q9HBL8 299 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 SLC6A20Q9NP91 592 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 PCMTD2Q9NV79 361 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ACOT9Q9Y305 439 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 PCDHGA4Q9Y5G9 962 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 A0A087X1B8 175 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 ZNF891A8MT65 544 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-217ENST00000479161 CDC7O00311 574 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 RIPK2O43353 540 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 FAM155BO75949 473 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 KRT38O76015 456 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 IPO13O94829 963 aaKnown RBP14.82□□□□□ -0.04
C9orf3-217ENST00000479161 INHBAP08476 426 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 MAGEA12P43365 314 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 PGGT1BP53609 377 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 PMS2P54278 862 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 GPS2Q13227 327 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 NAE1Q13564 534 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 TGFBIQ15582 683 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 TSNQ15631 228 aaKnown RBP14.82□□□□□ -0.04
C9orf3-217ENST00000479161 GARNL3Q5VVW2 1013 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 C19orf48Q6RUI8 117 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 TBC1D1Q86TI0 1168 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-217ENST00000479161 C17orf64Q86WR6 236 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 SPNS2Q8IVW8 549 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 FAM20CQ8IXL6 584 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 PPFIBP2Q8ND30 876 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 OR4K1Q8NGD4 311 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 RHEBL1Q8TAI7 183 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 STAG3L4Q8TBR4 150 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 CATSPER2Q96P56 530 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 OR2A5Q96R48 311 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 SELENOSQ9BQE4 189 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 NDC1Q9BTX1 674 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 DHRS4Q9BTZ2 278 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 ACAT2Q9BWD1 397 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 NLNQ9BYT8 704 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 CPNE5Q9HCH3 593 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 RALYQ9UKM9 306 aaKnown RBP14.82□□□□□ -0.04
C9orf3-217ENST00000479161 IKZF3Q9UKT9 509 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 LHX6Q9UPM6 363 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 IKBKGQ9Y6K9 419 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 IGSF10Q6WRI0 2623 aa14.82□□□□□ -0.04
C9orf3-217ENST00000479161 PHGDHO43175 533 aaKnown RBP14.81□□□□□ -0.04
C9orf3-217ENST00000479161 LTA4HP09960 611 aaKnown RBP14.81□□□□□ -0.04
C9orf3-217ENST00000479161 COL6A2P12110 1019 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 TCN2P20062 427 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 AGXTP21549 392 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 RPS15AP62244 130 aaKnown RBP14.81□□□□□ -0.04
C9orf3-217ENST00000479161 CXADRP78310 365 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 EFTUD2Q15029 972 aaKnown RBP eCLIP14.81□□□□□ -0.044e-7■■■□□ 18.8
C9orf3-217ENST00000479161 PRTGQ2VWP7 1150 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 LGSNQ5TDP6 509 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 THEMIS2Q5TEJ8 643 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 MROH9Q5TGP6 573 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 ISCA2Q86U28 154 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 VASH2Q86V25 355 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 PDPRQ8NCN5 879 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 LRRN4CLQ8ND94 238 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 RHBDF1Q96CC6 855 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 CLIP3Q96DZ5 547 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 MVB12AQ96EY5 273 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 GBP5Q96PP8 586 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 PAFAH2Q99487 392 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 CAPS2Q9BXY5 557 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 SPRTNQ9H040 489 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-217ENST00000479161 CNOT10Q9H9A5 744 aaKnown RBP14.81□□□□□ -0.04
C9orf3-217ENST00000479161 PPCSQ9HAB8 311 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 CROTQ9UKG9 612 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 TLK1Q9UKI8 766 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 KLHL20Q9Y2M5 609 aa14.81□□□□□ -0.04
C9orf3-217ENST00000479161 FASNP49327 2511 aaKnown RBP14.8□□□□□ -0.04
C9orf3-217ENST00000479161 SLU7O95391 586 aaKnown RBP14.8□□□□□ -0.04
C9orf3-217ENST00000479161 ALBP02768 609 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 ALDOAP04075 364 aaKnown RBP14.8□□□□□ -0.04
C9orf3-217ENST00000479161 C2P06681 752 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 CAPN1P07384 714 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 PIM1P11309 404 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-217ENST00000479161 PTPN4P29074 926 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 DLSTP36957 453 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 MSH2P43246 934 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 SLC6A12P48065 614 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 SERPINB8P50452 374 aa14.8□□□□□ -0.04
C9orf3-217ENST00000479161 RPS15P62841 145 aaKnown RBP14.8□□□□□ -0.04
C9orf3-217ENST00000479161 YBX1P67809 324 aaKnown RBP14.8□□□□□ -0.04
C9orf3-217ENST00000479161 DCDP81605 110 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms