RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 HEATR5BQ9P2D3 2071 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 A0A0J9YVX5 310 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 HYKKA2RU49 373 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 VSTM2BA6NLU5 285 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 TSPAN12O95859 305 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 EZRP15311 586 aaKnown RBP22.38■■□□□ 1.17
C9orf3-215ENST00000478473 CCL11P51671 97 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 CHAF1BQ13112 559 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 NKG7Q16617 165 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 PRMT9Q6P2P2 845 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 ARHGEF39Q8N4T4 335 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 CCDC138Q96M89 665 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 NXT1Q9UKK6 140 aaKnown RBP22.38■■□□□ 1.17
C9orf3-215ENST00000478473 CHMP2BQ9UQN3 213 aa22.38■■□□□ 1.17
C9orf3-215ENST00000478473 EFCAB8A8MWE9 144 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 MED26O95402 600 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 HRH2P25021 359 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 RPL21P46778 160 aaKnown RBP22.37■■□□□ 1.17
C9orf3-215ENST00000478473 PGDP52209 483 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 KCNC4Q03721 635 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 PPP1R32Q7Z5V6 425 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 MCOLN3Q8TDD5 553 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 MVB12AQ96EY5 273 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 PDLIM5Q96HC4 596 aaKnown RBP22.37■■□□□ 1.17
C9orf3-215ENST00000478473 FER1L6-AS2Q96M78 137 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 KRT12Q99456 494 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 SMAD5Q99717 465 aaKnown RBP22.37■■□□□ 1.17
C9orf3-215ENST00000478473 CLMPQ9H6B4 373 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 SYNPO2LQ9H987 977 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 PARVBQ9HBI1 364 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 PDE10AQ9Y233 779 aa22.37■■□□□ 1.17
C9orf3-215ENST00000478473 ASH1LQ9NR48 2969 aaKnown RBP22.37■■□□□ 1.17
C9orf3-215ENST00000478473 CCDC88CQ9P219 2028 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 IGLV3-12A0A075B6K2 115 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 FAM187AA6NFU0 413 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 H0YGG7 62 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 FDXRP22570 491 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 MMP11P24347 488 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 ARF3P61204 181 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-215ENST00000478473 MUM1Q2TAK8 710 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 DCAF10Q5QP82 559 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 GARNL3Q5VVW2 1013 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 TEX19Q8NA77 164 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 BBOF1Q8ND07 529 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 PPFIBP2Q8ND30 876 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 SPATA4Q8NEY3 305 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 FDCSPQ8NFU4 85 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 C10orf90Q96M02 699 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 PCBD2Q9H0N5 130 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 P4HTMQ9NXG6 502 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 STOX2Q9P2F5 926 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-215ENST00000478473 ADAMTS6Q9UKP5 1117 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 VWA7Q9Y334 891 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 ZNF451Q9Y4E5 1061 aa22.36■■□□□ 1.17
C9orf3-215ENST00000478473 KCNE1BA0A087WTH5 132 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 OTX2P32243 289 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 ETF1P62495 437 aaKnown RBP22.35■■□□□ 1.17
C9orf3-215ENST00000478473 FOXK1P85037 733 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 SLC9A5Q14940 896 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 HECTD2Q5U5R9 776 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 FAM45BPQ6NSW5 357 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 TMEM151BQ8IW70 566 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 FAM45AQ8TCE6 357 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 CFAP36Q96G28 342 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 ERP44Q9BS26 406 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 MCMBPQ9BTE3 642 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 TRIM4Q9C037 500 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 WHRNQ9P202 907 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 C5AR2Q9P296 337 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 SLC17A6Q9P2U8 582 aa22.35■■□□□ 1.17
C9orf3-215ENST00000478473 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.35■■□□□ 1.17
C9orf3-215ENST00000478473 PEX12O00623 359 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 TXNDC9O14530 226 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 SYF2O95926 243 aaKnown RBP22.34■■□□□ 1.17
C9orf3-215ENST00000478473 IL2P60568 153 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 MGAT5Q09328 741 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 ILF2Q12905 390 aaKnown RBP22.34■■□□□ 1.17
C9orf3-215ENST00000478473 HP1BP3Q5SSJ5 553 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-215ENST00000478473 MAATS1Q7Z4T9 603 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 SLC26A11Q86WA9 606 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 MYO1HQ8N1T3 1032 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 FBXO36Q8NEA4 188 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-215ENST00000478473 ANKRD7Q92527 254 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 LINGO1Q96FE5 620 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 NUDT9Q9BW91 350 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 SGPP1Q9BX95 441 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 ZNF304Q9HCX3 659 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 CCDC177Q9NQR7 707 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-215ENST00000478473 TMEM184CQ9NVA4 438 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 SNX24Q9Y343 169 aa22.34■■□□□ 1.17
C9orf3-215ENST00000478473 PYCARD-AS1I3L0S3 204 aa22.33■■□□□ 1.17
C9orf3-215ENST00000478473 AGPSO00116 658 aa22.33■■□□□ 1.17
C9orf3-215ENST00000478473 CCND1P24385 295 aa22.33■■□□□ 1.17
C9orf3-215ENST00000478473 OR1D4P47884 311 aa22.33■■□□□ 1.17
C9orf3-215ENST00000478473 AP1S2P56377 157 aa22.33■■□□□ 1.17
C9orf3-215ENST00000478473 FOXL2P58012 376 aa22.33■■□□□ 1.17
C9orf3-215ENST00000478473 PDIA2Q13087 525 aaKnown RBP22.33■■□□□ 1.17
C9orf3-215ENST00000478473 FASTKD3Q14CZ7 662 aaKnown RBP22.33■■□□□ 1.17
C9orf3-215ENST00000478473 AGTRAPQ6RW13 159 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms