RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 SIMC1Q8NDZ2 872 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 OR13C4Q8NGS5 318 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 OR4L1Q8NH43 312 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 ZFP28Q8NHY6 868 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 SETD7Q8WTS6 366 aaKnown RBP4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 GLYATL1Q969I3 302 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 HDAC10Q969S8 669 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 CENPTQ96BT3 561 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 CDKN2AIPNLQ96HQ2 116 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 SERPINB12Q96P63 405 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 VPS35Q96QK1 796 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 PANX3Q96QZ0 392 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 RHOXF2Q9BQY4 288 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 CCDC77Q9BR77 488 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 TRIM51Q9BSJ1 452 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 LRRC1Q9BTT6 524 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 CLPBQ9H078 707 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 SUDS3Q9H7L9 328 aaPredicted RBP4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 FZD3Q9NPG1 666 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 TM7SF3Q9NS93 570 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 C20orf96Q9NUD7 363 aaPredicted RBP4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 NLE1Q9NVX2 485 aaPredicted RBP4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 PIH1D1Q9NWS0 290 aaKnown RBP4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 IL17CQ9P0M4 197 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 VPS18Q9P253 973 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 NFKBIL1Q9UBC1 381 aaPredicted RBP4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 OR1A2Q9Y585 309 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 ARL5AQ9Y689 179 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 RPS6KL1Q9Y6S9 549 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 UNC80Q8N2C7 3258 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 THADAQ6YHU6 1953 aa4.42□□□□□ -1.7
NSMCE4A-208ENST00000477289 SPTY2D1-AS1A0A0U1RR47 76 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 A0A1W2PR77 199 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 POM121BA6NF01 834 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 H7C0S8 307 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 IFRD1O00458 451 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 RAD51BO15315 384 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CD3EAPO15446 510 aaKnown RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 AQP9O43315 295 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 GRID2O43424 1007 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 ERLIN1O75477 346 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 AP2A2O94973 939 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 VAPBO95292 243 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 ESRRBO95718 433 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 GOT2P00505 430 aaKnown RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CSF2P04141 144 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 RPN2P04844 631 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 IVLP07476 585 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 ZNF883P0CG24 379 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CDK4P11802 303 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 IDSP22304 550 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 STX2P32856 288 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 TRIM23P36406 574 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 GRK6P43250 576 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 RPL21P46778 160 aaKnown RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 GNPDA1P46926 289 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 ID4P47928 161 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 HK3P52790 923 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CLRN1P58418 232 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 PFN3P60673 137 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 TMEM115Q12893 351 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 NFATC2Q13469 925 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 ITIH4Q14624 930 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 SF3A2Q15428 464 aaKnown RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CHRNA6Q15825 494 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CCDC6Q16204 474 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 UGT8Q16880 541 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 KIF19Q2TAC6 998 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 HLA-BQ31612 363 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 TTLL9Q3SXZ7 439 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 SYTL3Q4VX76 610 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 HENMT1Q5T8I9 393 aaKnown RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 LGSNQ5TDP6 509 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 B3GNTL1Q67FW5 361 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 DUPD1Q68J44 220 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 PTRHD1Q6GMV3 140 aaKnown RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 KIAA0930Q6ICG6 404 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 HIBCHQ6NVY1 386 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 LVRNQ6Q4G3 990 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 TMEM220Q6QAJ8 160 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 GCNT7Q6ZNI0 430 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 MARK2Q7KZI7 788 aaKnown RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CHST15Q7LFX5 561 aaPredicted RBP4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 KCNMB4Q86W47 210 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 LRRC6Q86X45 466 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 KLHDC8BQ8IXV7 354 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 KIAA2013Q8IYS2 634 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 TTC30BQ8N4P2 665 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 RAB42Q8N4Z0 105 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 GLIS1Q8NBF1 620 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 CLRN3Q8NCR9 226 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 FBXO36Q8NEA4 188 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 OR6C4Q8NGE1 309 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 OR56A1Q8NGH5 318 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 LMX1AQ8TE12 382 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 USP7Q93009 1102 aa4.41□□□□□ -1.7
NSMCE4A-208ENST00000477289 SCAMP4Q969E2 229 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms