RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 DEPDC5O75140 1603 aa4.34□□□□□ -1.71
PIKFYVE-209ENST00000477200 XRN1Q8IZH2 1706 aaKnown RBP4.34□□□□□ -1.71
PIKFYVE-209ENST00000477200 MAP2P11137 1827 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 MROH1Q8NDA8 1641 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 A0A0G2JPF8 293 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 LOC100653049A0A140TA62 436 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 A0A1B0GVM2 712 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PRSS47A8MTI9 375 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PDZK1P1A8MUH7 402 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 B4DGG1 531 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 HNRNPCL3B7ZW38 293 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 LOC110117498-PIK3R3F6TDL0 507 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 STMND1H3BQB6 276 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 EYA2O00167 538 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 UPK1BO75841 260 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 KRT34O76011 436 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 SEC14L2O76054 403 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 RHOBTB1O94844 696 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 DEXIO95424 95 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GOT2P00505 430 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GH1P01241 217 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 S100A9P06702 114 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 SERPINA6P08185 405 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 HOXD4P09016 255 aaPredicted RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 DLDP09622 509 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 SMIM6P0DI80 62 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 HNRNPCL4P0DMR1 293 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PSKH1P11801 424 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 IL7P13232 177 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 AKR1B1P15121 316 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CKMT2P17540 419 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 DNAJB1P25685 340 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 S100PP25815 95 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GABRB3P28472 473 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CCND2P30279 289 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 HMGCLP35914 325 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CPOXP36551 454 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 OPRL1P41146 370 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 RPS5P46782 204 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ATP5OP48047 213 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 MEOX2P50222 304 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 NDST2P52849 883 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GBX2P52951 348 aaPredicted RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ROR1Q01973 937 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GNA12Q03113 381 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 TRAF2Q12933 501 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FHL3Q13643 280 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GCKRQ14397 625 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ANGPT1Q15389 498 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 TAB1Q15750 504 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CYP1B1Q16678 543 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PGS1Q32NB8 556 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 SETMARQ53H47 684 aaPredicted RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FBXO48Q5FWF7 155 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FGD3Q5JSP0 725 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ATAD3CQ5T2N8 411 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PDPK2PQ6A1A2 396 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 C3orf33Q6P1S2 294 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FUT10Q6P4F1 479 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZNF549Q6P9A3 640 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 BRAT1Q6PJG6 821 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 DEF8Q6ZN54 512 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 NOXA1Q86UR1 476 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PIM3Q86V86 326 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 SLC22A16Q86VW1 577 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 RAVER1Q8IY67 606 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GRAMD1CQ8IYS0 662 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 RBFAQ8N0V3 343 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CLEC4FQ8N1N0 589 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FBXW8Q8N3Y1 598 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CPA6Q8N4T0 437 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ARFGAP1Q8N6T3 406 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PLD5Q8N7P1 536 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CNTD1Q8N815 330 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 LEMD2Q8NC56 503 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 OR13F1Q8NGS4 319 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 URGCPQ8TCY9 931 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 TCP10LQ8TDR4 215 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PHF10Q8WUB8 498 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 DNAJA4Q8WW22 397 aaPredicted RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ASZ1Q8WWH4 475 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PYDC1Q8WXC3 89 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 AKAP1Q92667 903 aaKnown RBP eCLIP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ATP6V1E2Q96A05 226 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 PPWD1Q96BP3 646 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 TUBGCP3Q96CW5 907 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FEM1CQ96JP0 617 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 TBCBQ99426 244 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZPBPQ9BS86 351 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FSD1Q9BTV5 496 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 GTPBP2Q9BX10 602 aaKnown RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 NPLQ9BXD5 320 aaPredicted RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 TMEM120AQ9BXJ8 343 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FAM126AQ9BYI3 521 aaPredicted RBP4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 NYXQ9GZU5 481 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 TWSG1Q9GZX9 223 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 FAM234AQ9H0X4 552 aa4.33□□□□□ -1.72
PIKFYVE-209ENST00000477200 CDC42EP4Q9H3Q1 356 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms