RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 FOXN2P32314 431 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 MAN2A2P49641 1150 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 ARHGAP1Q07960 439 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 NAT8LQ8N9F0 302 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 OR10G2Q8NGC3 310 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 MIPEPQ99797 713 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 EIF2B3Q9NR50 452 aaKnown RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 FARSBQ9NSD9 589 aaKnown RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 KMOO15229 486 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TBX1O43435 398 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TYRP14679 529 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 AGXTP21549 392 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 ACSL1P33121 698 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 ZNF234Q14588 700 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 IQCCQ4KMZ1 466 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 CMTR2Q8IYT2 770 aaKnown RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 FCRL5Q96RD9 977 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 SLC32A1Q9H598 525 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 LGALS13Q9UHV8 139 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 HS3ST4Q9Y661 456 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 C9J4A7 227 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TNFRSF10BO14763 440 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 GATMP50440 423 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 RNF144AP50876 292 aaPredicted RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 KIAA0930Q6ICG6 404 aaPredicted RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 PLA2G15Q8NCC3 412 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 NFKBIDQ8NI38 313 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 SLC22A18Q96BI1 424 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 CCM2Q9BSQ5 444 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TIMMDC1Q9NPL8 285 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 GIN1Q9NXP7 522 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 SPATA7Q9P0W8 599 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 YIPF1Q9Y548 306 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 POP7O75817 140 aaKnown RBP10.69□□□□□ -0.7
VAPB-204ENST00000475243 IMPDH1P20839 514 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 NRIP1P48552 1158 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 RORCP51449 518 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 DSTNP60981 165 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ZNF554Q86TJ5 538 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 FOXRED2Q8IWF2 684 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 OR8H3Q8N146 312 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 C1orf216Q8TAB5 229 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 FUBP3Q96I24 572 aaKnown RBP eCLIP10.69□□□□□ -0.7
VAPB-204ENST00000475243 EDNRAP25101 427 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ABCA11PQ4W5N1 156 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 CEACAM20Q6UY09 585 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ASB18Q6ZVZ8 466 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ACDQ96AP0 544 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 LRRC3Q9BY71 257 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ZNF395Q9H8N7 513 aaPredicted RBP10.69□□□□□ -0.7
VAPB-204ENST00000475243 SERINC1Q9NRX5 453 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 TAS2R7Q9NYW3 318 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 KLRF1Q9NZS2 232 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ATXN10Q9UBB4 475 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ZNF639Q9UID6 485 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 KCNK6Q9Y257 313 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 INSL6Q9Y581 213 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 NOX1Q9Y5S8 564 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 SLC35F4A4IF30 521 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 LOC730098B7Z3J9 87 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 CASRP41180 1078 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ID2Q02363 134 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 GHRHRQ02643 423 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 C4orf46Q504U0 113 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ARHGAP40Q5TG30 622 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 C1orf94Q6P1W5 598 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 THOC6Q86W42 341 aaKnown RBP10.69□□□□□ -0.7
VAPB-204ENST00000475243 PRICKLE1Q96MT3 831 aaPredicted RBP10.69□□□□□ -0.7
VAPB-204ENST00000475243 CNTN3Q9P232 1028 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 EIF3KQ9UBQ5 218 aaKnown RBP10.69□□□□□ -0.7
VAPB-204ENST00000475243 PCDHB11Q9Y5F2 797 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ANKRD66B4E2M5 251 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 CCL5P13501 91 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 DSC3Q14574 896 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 LRRC66Q68CR7 880 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 FRMD7Q6ZUT3 714 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 BARD1Q99728 777 aaKnown RBP10.69□□□□□ -0.7
VAPB-204ENST00000475243 ZSCAN5AQ9BUG6 496 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 RBCK1Q9BYM8 510 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 UPB1Q9UBR1 384 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 SAGE2PA6NJ88 616 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ZSCAN5BA6NJL1 495 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 SCGB1D2O95969 90 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 CD36P16671 472 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 RIN1Q13671 783 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 DCAF12L1Q5VU92 463 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 TPGS2Q68CL5 300 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 SMYD5Q6GMV2 418 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 TTLQ8NG68 377 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 OAZ3Q9UMX2 235 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 SMIM30A4D0T7 59 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 GRXCR1A8MXD5 290 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 BLOC1S5-TXNDC5H3BN57 136 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 J3QLW9 94 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 ZNF19P17023 458 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 PRPS1L1P21108 318 aa10.69□□□□□ -0.7
VAPB-204ENST00000475243 CSTF2P33240 577 aaKnown RBP eCLIP10.69□□□□□ -0.7
VAPB-204ENST00000475243 SCGB2B2Q4G0G5 96 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms