RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	BMPR1B	O00238	502 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	P2RY10	O00398	339 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	FGF17	O60258	216 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	PRAF2	O60831	178 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	KRT33A	O76009	404 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	DFFB	O76075	338 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	GOSR1	O95249	250 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	IGHV4-59	P01825	116 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	PSMB4	P28070	264 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	KHK	P50053	298 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	ST8SIA6	P61647	398 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	ARL16	Q0P5N6	197 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	RASGEF1B	Q0VAM2	473 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	ZNF674	Q2M3X9	581 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	WDR38	Q5JTN6	314 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
BBX-223	ENST00000473542	CYB5D1	Q6P9G0	228 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	RTN4RL2	Q86UN3	420 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	CDK20	Q8IZL9	346 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	SYCP3	Q8IZU3	236 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	MARVELD2	Q8N4S9	558 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	ZNF713	Q8N859	430 aa	Predicted RBP	4.24	□□□□□ -1.73
BBX-223	ENST00000473542	UXS1	Q8NBZ7	420 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	DBF4B	Q8NFT6	615 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	EXOC4	Q96A65	974 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	BSCL2	Q96G97	398 aa	Predicted RBP	4.24	□□□□□ -1.73
BBX-223	ENST00000473542	GDAP1L1	Q96MZ0	367 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	MMP28	Q9H239	520 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.24	□□□□□ -1.73
BBX-223	ENST00000473542	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.24	□□□□□ -1.73
BBX-223	ENST00000473542	PKD2L2	Q9NZM6	624 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542	GRID1	Q9ULK0	1009 aa		4.24	□□□□□ -1.73
BBX-223	ENST00000473542		A0A0B4J203	849 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	ILVBL	A1L0T0	632 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	KBTBD13	C9JR72	458 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542		F8VVB4	439 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542		F8VWA3	439 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	SLC22A2	O15244	555 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	SLC16A8	O95907	504 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	MOCS2	O96007	188 aa	Predicted RBP	4.23	□□□□□ -1.73
BBX-223	ENST00000473542	FRMD6-AS1	P0C7T7	363 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	KRT3	P12035	628 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	ITGA3	P26006	1051 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	DLX5	P56178	289 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	RPL36A	P83881	106 aa	Known RBP	4.23	□□□□□ -1.73
BBX-223	ENST00000473542	TRAP1	Q12931	704 aa	Known RBP	4.23	□□□□□ -1.73
BBX-223	ENST00000473542	GPR17	Q13304	367 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	UGP2	Q16851	508 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	C2orf76	Q3KRA6	126 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	ZNF718	Q3SXZ3	478 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	XKR6	Q5GH73	641 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	FAM166A	Q6J272	317 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	SMIM29	Q86T20	159 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	CLYBL	Q8N0X4	340 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	DNAJC22	Q8N4W6	341 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	FCAMR	Q8WWV6	532 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	TM9SF4	Q92544	642 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	PYCR2	Q96C36	320 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	ALG14	Q96F25	216 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	ZNF354B	Q96LW1	612 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	CCDC43	Q96MW1	224 aa	Known RBP	4.23	□□□□□ -1.73
BBX-223	ENST00000473542	CDK19	Q9BWU1	502 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	OR2B2	Q9GZK3	357 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.23	□□□□□ -1.73
BBX-223	ENST00000473542	DONSON	Q9NYP3	566 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	FBXL5	Q9UKA1	691 aa		4.23	□□□□□ -1.73
BBX-223	ENST00000473542	ST8SIA3	O43173	380 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	GLRA3	O75311	464 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	CAVIN2	O95810	425 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	GH1	P01241	217 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	EDN1	P05305	212 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	C8orf89	P0DMQ9	161 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	LBP	P18428	481 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	ITIH1	P19827	911 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	ANOS1	P23352	680 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	CASP3	P42574	277 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	IL10RB	Q08334	325 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	NONO	Q15233	471 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	SLC35E4	Q6ICL7	350 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	BTNL8	Q6UX41	500 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	G2E3	Q7L622	706 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	MEX3D	Q86XN8	651 aa	Known RBP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	CREBRF	Q8IUR6	639 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	EID3	Q8N140	333 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	CIART	Q8N365	385 aa	Predicted RBP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	LMNTD1	Q8N9Z9	388 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	ZNF383	Q8NA42	475 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	CKAP2	Q8WWK9	683 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	TSACC	Q96A04	125 aa	Predicted RBP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	SGF29	Q96ES7	293 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	HNRNPAB	Q99729	332 aa	Known RBP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	PSD2	Q9BQI7	771 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	ATG101	Q9BSB4	218 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	LSG1	Q9H089	658 aa	Known RBP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	UBQLN3	Q9H347	655 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	BICC1	Q9H694	974 aa	Known RBP	4.22	□□□□□ -1.73
BBX-223	ENST00000473542	SRD5A3	Q9H8P0	318 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	TMEM161A	Q9NX61	479 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	P4HTM	Q9NXG6	502 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms