RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 RND1Q92730 232 aa13.21□□□□□ -0.29
SMURF1-203ENST00000472627 RAD51AP1Q96B01 352 aa13.21□□□□□ -0.29
SMURF1-203ENST00000472627 IMMP1LQ96LU5 166 aa13.21□□□□□ -0.29
SMURF1-203ENST00000472627 TBL1YQ9BQ87 522 aa13.21□□□□□ -0.29
SMURF1-203ENST00000472627 NLE1Q9NVX2 485 aaPredicted RBP13.21□□□□□ -0.29
SMURF1-203ENST00000472627 DNAJB12Q9NXW2 375 aaKnown RBP13.21□□□□□ -0.29
SMURF1-203ENST00000472627 IMPACTQ9P2X3 320 aa13.21□□□□□ -0.29
SMURF1-203ENST00000472627 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.29
SMURF1-203ENST00000472627 KLK4Q9Y5K2 254 aa13.21□□□□□ -0.29
SMURF1-203ENST00000472627 SNRNP200O75643 2136 aaKnown RBP13.21□□□□□ -0.3
SMURF1-203ENST00000472627 H7C0C1 242 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 TXNDC9O14530 226 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 ZNF189O75820 626 aaPredicted RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 APOA4P06727 396 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 TPOP07202 933 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 HOXD4P09016 255 aaPredicted RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 PTGS2P35354 604 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 PPARGP37231 505 aaPredicted RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 SLC26A3P40879 764 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 ATP5OP48047 213 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 CSE1LP55060 971 aaKnown RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 CEBPEQ15744 281 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 EXT1Q16394 746 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 GALNTL5Q7Z4T8 443 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 SIAH3Q8IW03 269 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 CSNK1A1LQ8N752 337 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 POGLUT1Q8NBL1 392 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 STYXQ8WUJ0 223 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 RERGQ96A58 199 aaPredicted RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 HAUS1Q96CS2 278 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 RMND5BQ96G75 393 aaPredicted RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 MRFAP1L1Q96HT8 127 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 C10orf90Q96M02 699 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 IL17FQ96PD4 163 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 SIGLEC12Q96PQ1 595 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 MIPEPQ99797 713 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 DRC3Q9H069 523 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
SMURF1-203ENST00000472627 ANKRD10Q9NXR5 420 aa13.2□□□□□ -0.3
SMURF1-203ENST00000472627 ABCA4P78363 2273 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 LOC105369274A0A096LPK9 316 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 LOC102723532A0A0G2JNH3 316 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 ADAM10O14672 748 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 WISP2O76076 250 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 MED26O95402 600 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 SP1P08047 785 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
SMURF1-203ENST00000472627 PSMB4P28070 264 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 CMPK1P30085 196 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 CD96P40200 585 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 AVPR1BP47901 424 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 LTBQ06643 244 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 SLC18A3Q16572 532 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 MAPKAPK3Q16644 382 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 NDUFA9Q16795 377 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 PRTGQ2VWP7 1150 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 SPINK14Q6IE38 97 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 SLC25A25Q6KCM7 469 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 CPEB2Q7Z5Q1 589 aaKnown RBP13.19□□□□□ -0.3
SMURF1-203ENST00000472627 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.19□□□□□ -0.3
SMURF1-203ENST00000472627 CCDC50Q8IVM0 306 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 PIANPQ8IYJ0 282 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 OR4N4Q8N0Y3 316 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 OR2L3Q8NG85 312 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 FAM57AQ8TBR7 257 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 MAGEC3Q8TD91 643 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 CDKN2AIPNLQ96HQ2 116 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 ALPK1Q96QP1 1244 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 OLFM1Q99784 485 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 MENTQ9BUN1 341 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 REPIN1Q9BWE0 567 aaKnown RBP13.19□□□□□ -0.3
SMURF1-203ENST00000472627 TP63Q9H3D4 680 aaPredicted RBP13.19□□□□□ -0.3
SMURF1-203ENST00000472627 GSX1Q9H4S2 264 aaPredicted RBP13.19□□□□□ -0.3
SMURF1-203ENST00000472627 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 ST6GALNAC2Q9UJ37 374 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 GNPTGQ9UJJ9 305 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 PRSS21Q9Y6M0 314 aa13.19□□□□□ -0.3
SMURF1-203ENST00000472627 FAM237BA0A1B0GVD1 139 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 NKX2-6A6NCS4 301 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 FFAR3O14843 346 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 TFECO14948 347 aaPredicted RBP13.18□□□□□ -0.3
SMURF1-203ENST00000472627 GPR42O15529 346 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 PRSS56P0CW18 603 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 PKMP14618 531 aaKnown RBP13.18□□□□□ -0.3
SMURF1-203ENST00000472627 CTNNA2P26232 953 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 RBL1P28749 1068 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 AGTR2P50052 363 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 DGKQP52824 942 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 HSF1Q00613 529 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 FASTKQ14296 549 aaKnown RBP13.18□□□□□ -0.3
SMURF1-203ENST00000472627 NR1I3Q14994 352 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 MINDY4Q4G0A6 757 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms