RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 EXO1Q9UQ84 846 aaKnown RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 LYVE1Q9Y5Y7 322 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 WDR90Q96KV7 1748 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 ASTN2O75129 1339 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 PLIN4Q96Q06 1357 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 MED19A0JLT2 244 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-202ENST00000471307 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 FRMD3A2A2Y4 597 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 MPHOSPH10O00566 681 aaKnown RBP4.93□□□□□ -1.62
CCDC39-202ENST00000471307 ZNF821O75541 412 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-202ENST00000471307 EDN1P05305 212 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 ASNSP08243 561 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 TOP1P11387 765 aaKnown RBP4.93□□□□□ -1.62
CCDC39-202ENST00000471307 AKR1B1P15121 316 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 KIF5BP33176 963 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 NF2P35240 595 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 WNT5AP41221 380 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 RXRGP48443 463 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 IKQ13123 557 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-202ENST00000471307 PRKG2Q13237 762 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 MAMLD1Q13495 774 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 KRT71Q3SY84 523 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 TMEM198Q66K66 360 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 ERP27Q96DN0 273 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 GAD1Q99259 594 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 HGH1Q9BTY7 390 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 DNAJC18Q9H819 358 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 FLRT3Q9NZU0 649 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 CLIP2Q9UDT6 1046 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 AMACRQ9UHK6 382 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 STX8Q9UNK0 236 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 MRPS28Q9Y2Q9 187 aaKnown RBP4.93□□□□□ -1.62
CCDC39-202ENST00000471307 TTLL3Q9Y4R7 772 aa4.93□□□□□ -1.62
CCDC39-202ENST00000471307 A0A087X0M5 115 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 IGHV4-61A0A0C4DH41 118 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 A0A1B0GX30 115 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 OR6C76A6NM76 312 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 CDRT15L2A8MXV6 281 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 PLOD2O00469 737 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 CPLX1O14810 134 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 NMT2O60551 498 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 BAIAP3O94812 1187 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 OR2C1O95371 312 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 IGHV4-59P01825 116 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 RARGP13631 454 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 CBLP22681 906 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 PON1P27169 355 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 CLK1P49759 484 aaKnown RBP4.92□□□□□ -1.62
CCDC39-202ENST00000471307 BMXP51813 675 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 HMGN5P82970 282 aaKnown RBP4.92□□□□□ -1.62
CCDC39-202ENST00000471307 TMEM187Q14656 261 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 TOMM20Q15388 145 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 SLC1A5Q15758 541 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 FAM133BQ5BKY9 247 aaKnown RBP4.92□□□□□ -1.62
CCDC39-202ENST00000471307 GCNT6Q5T4J0 391 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 ADALQ6DHV7 355 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 FAM180BQ6P0A1 224 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 LINGO4Q6UY18 593 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 CCDC83Q8IWF9 413 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 ZNF611Q8N823 705 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 NECAB1Q8N987 351 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 MRGPRDQ8TDS7 321 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 SCFD2Q8WU76 684 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 UCMAQ8WVF2 138 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 GMPPAQ96IJ6 420 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-202ENST00000471307 POM121L2Q96KW2 1035 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 DDOQ99489 341 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 LZTS2Q9BRK4 669 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 ZNF71Q9NQZ8 489 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-202ENST00000471307 RBM28Q9NW13 759 aaKnown RBP4.92□□□□□ -1.62
CCDC39-202ENST00000471307 CLIC5Q9NZA1 410 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 AASSQ9UDR5 926 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 CACNG5Q9UF02 275 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 RASAL2Q9UJF2 1139 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 NAP1L2Q9ULW6 460 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-202ENST00000471307 SMC3Q9UQE7 1217 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 KIF3AQ9Y496 699 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 SIPA1L1O43166 1804 aa4.92□□□□□ -1.62
CCDC39-202ENST00000471307 NID2Q14112 1375 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 PRR32B1ATL7 298 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 EEF2P13639 858 aaKnown RBP4.91□□□□□ -1.62
CCDC39-202ENST00000471307 IFNAR1P17181 557 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 FKBP1BP68106 108 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 GTDC1Q4AE62 458 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 FFAR4Q5NUL3 377 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 SNX30Q5VWJ9 437 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 C1orf122Q6ZSJ8 110 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 IKBIPQ70UQ0 350 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 SCYL3Q8IZE3 742 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 CRYBG2Q8N1P7 616 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 GMCL1P1Q8NEA9 526 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 SGK494Q96LW2 274 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 TIGD1Q96MW7 591 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 MCRIP2Q9BUT9 160 aaKnown RBP4.91□□□□□ -1.62
CCDC39-202ENST00000471307 TBC1D22BQ9NU19 505 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 ATAD3AQ9NVI7 634 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 FBXL17Q9UF56 701 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 MYH4Q9Y623 1939 aa4.91□□□□□ -1.62
CCDC39-202ENST00000471307 ELOVL7A1L3X0 281 aa4.9□□□□□ -1.63
CCDC39-202ENST00000471307 C19orf81C9J6K1 198 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms