RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 BTBD16Q32M84 506 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 TAX1BP1Q86VP1 789 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 SERPINA9Q86WD7 417 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 CDC20BQ86Y33 519 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 CRLF3Q8IUI8 442 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 OR4N4Q8N0Y3 316 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 C2orf73Q8N5S3 287 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 AMER3Q8N944 861 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 OR13C4Q8NGS5 318 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 GOT1L1Q8NHS2 421 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 ELMO1Q92556 727 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 NPAS2Q99743 824 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 KLHL8Q9P2G9 620 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 MXRA5Q9NR99 2828 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 SLC5A10A0PJK1 596 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 C3orf70A6NLC5 250 aaPredicted RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 USP27XA6NNY8 438 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 GABRR3A8MPY1 467 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 NME2P1O60361 137 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 SLC25A12O75746 678 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 ATE1O95260 518 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 LY6G6DO95868 133 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 AGTP01019 485 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 RAF1P04049 648 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 EIF2S1P05198 315 aaKnown RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 ERVK-10P10266 1014 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 SKILP12757 684 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 NME2P22392 152 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 CDKN1CP49918 316 aaPredicted RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 ST13P50502 369 aaKnown RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 OC90Q02509 493 aaPredicted RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 PMPCAQ10713 525 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 BRD3Q15059 726 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 MAPKAPK3Q16644 382 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 SYTL3Q4VX76 610 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 DNAJC21Q5F1R6 531 aaKnown RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 ARSKQ6UWY0 536 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 ACAD11Q709F0 780 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 RNF44Q7L0R7 432 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 ZC3H7AQ8IWR0 971 aaKnown RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 RPRMLQ8N4K4 120 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 LMNTD1Q8N9Z9 388 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 OR2L8Q8NGY9 312 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 TFB1MQ8WVM0 346 aaKnown RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 METTL21AQ8WXB1 218 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 CABS1Q96KC9 395 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 PWWP2AQ96N64 755 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 MAK16Q9BXY0 300 aaKnown RBP11.33□□□□□ -0.6
LSM2-209ENST00000470083 KCNK13Q9HB14 408 aa11.33□□□□□ -0.6
LSM2-209ENST00000470083 IGHV3-20A0A0C4DH32 117 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 A0A0J9YVX5 310 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 QSOX1O00391 747 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 CCL22O00626 93 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 CDK2AP1O14519 115 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 TFECO14948 347 aaPredicted RBP11.32□□□□□ -0.6
LSM2-209ENST00000470083 MAN1A2O60476 641 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 CRTAMO95727 393 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 FTH1P02794 183 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 CYC1P08574 325 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 ANXA5P08758 320 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 MC4RP32245 332 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 NUP107P57740 925 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 UNC5DQ6UXZ4 953 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 PID1Q7Z2X4 250 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 CPEB2Q7Z5Q1 589 aaKnown RBP11.32□□□□□ -0.6
LSM2-209ENST00000470083 KRTAP1-3Q8IUG1 177 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 DCUN1D3Q8IWE4 304 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 LGI4Q8N135 537 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 ZNF567Q8N184 647 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 SLC5A8Q8N695 610 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 POGLUT1Q8NBL1 392 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 IL17FQ96PD4 163 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 VAT1Q99536 393 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 VN1R1Q9GZP7 353 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 ZNF395Q9H8N7 513 aaPredicted RBP11.32□□□□□ -0.6
LSM2-209ENST00000470083 ALG6Q9Y672 507 aa11.32□□□□□ -0.6
LSM2-209ENST00000470083 A6NNC1 897 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 NRP2O60462 931 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 RPN2P04844 631 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 KIR2DL3P43628 341 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 NR2C2P49116 596 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 DYNLT1P63172 113 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 MSLNQ13421 630 aaPredicted RBP11.31□□□□□ -0.6
LSM2-209ENST00000470083 KEAP1Q14145 624 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 GRB7Q14451 532 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 EXT1Q16394 746 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 DBN1Q16643 649 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 ARHGAP11AQ6P4F7 1023 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 RANBP10Q6VN20 620 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 LANCL3Q6ZV70 420 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 BZW1Q7L1Q6 419 aaKnown RBP11.31□□□□□ -0.6
LSM2-209ENST00000470083 TAS2R42Q7RTR8 314 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 RFX6Q8HWS3 928 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 MMABQ96EY8 250 aaPredicted RBP11.31□□□□□ -0.6
LSM2-209ENST00000470083 COX4I2Q96KJ9 171 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 ZFYVE21Q9BQ24 234 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 SLC6A16Q9GZN6 736 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 MMP25Q9NPA2 562 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms