RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CDC20Q12834 499 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 BNIP1Q12981 228 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 ZNF470Q6ECI4 717 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 TTC23LQ6PF05 361 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 ZNF843Q8N446 348 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 OR2L8Q8NGY9 312 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 RAD51AP1Q96B01 352 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 MTBPQ96DY7 904 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SEMA4CQ9C0C4 833 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 IL1RAPL1Q9NZN1 696 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 TMEM150CB9EJG8 249 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 TRIM49D1C9J1S8 452 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 DCTN3O75935 186 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 KRT38O76015 456 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SFTPCP11686 197 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 PGAM1P18669 254 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 TCN2P20062 427 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 CD9P21926 228 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 CCNFP41002 786 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SERPINB9P50453 376 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 DNASE1L3Q13609 305 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SWT1Q5T5J6 900 aaKnown RBP13.94□□□□□ -0.18
COL27A1-203ENST00000468565 BORAQ6PGQ7 559 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 ZNF517Q6ZMY9 492 aaPredicted RBP13.94□□□□□ -0.18
COL27A1-203ENST00000468565 CDHR3Q6ZTQ4 885 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 TRIM73Q86UV7 250 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 EXD3Q8N9H8 876 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL27A1-203ENST00000468565 OR1L3Q8NH93 324 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 MAGEC3Q8TD91 643 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 CT55Q8WUE5 264 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SLC22A18Q96BI1 424 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 FOPNLQ96NB1 174 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 FAM117AQ9C073 453 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 IQCGQ9H095 443 aaKnown RBP13.94□□□□□ -0.18
COL27A1-203ENST00000468565 C20orf96Q9NUD7 363 aaPredicted RBP13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SLC17A7Q9P2U7 560 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 SERTAD3Q9UJW9 196 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 ISM1B1AKI9 464 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 E5RI56 91 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 COPEO14579 308 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 C1orf105O95561 183 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 C1QAP02745 245 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 TROVE2P10155 538 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL27A1-203ENST00000468565 CHRM3P20309 590 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 DENND6AQ8IWF6 608 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 ZBTB2Q8N680 514 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 LINC01555Q8NAE3 123 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 HMGCLL1Q8TB92 370 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 SKA2Q8WVK7 121 aaPredicted RBP13.93□□□□□ -0.18
COL27A1-203ENST00000468565 TACO1Q9BSH4 297 aaKnown RBP13.93□□□□□ -0.18
COL27A1-203ENST00000468565 FAM167BQ9BTA0 163 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 NAT9Q9BTE0 207 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 GPR87Q9BY21 358 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 KLHL25Q9H0H3 589 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 MANSC1Q9H8J5 431 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 SLCO1B3Q9NPD5 702 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 KLHL42Q9P2K6 505 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 SLC39A10Q9ULF5 831 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 MRPS18BQ9Y676 258 aaKnown RBP13.93□□□□□ -0.18
COL27A1-203ENST00000468565 COMMD10Q9Y6G5 202 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 HEATR5BQ9P2D3 2071 aa13.93□□□□□ -0.18
COL27A1-203ENST00000468565 FASNP49327 2511 aaKnown RBP13.93□□□□□ -0.18
COL27A1-203ENST00000468565 FAM159BA6NKW6 160 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 FKBP9O95302 570 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 MATN4O95460 622 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 KLK3P07288 261 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-203ENST00000468565 NEFHP12036 1026 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 SLC1A2P43004 574 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 GABRA4P48169 554 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 ITGA1P56199 1179 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 NCALDP61601 193 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CTBP1Q13363 440 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 ZIC1Q15915 447 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CYS1Q717R9 158 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 RAB42Q8N4Z0 105 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 FITM2Q8N6M3 262 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 ADNPQ9H2P0 1102 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 FAM60AQ9NP50 221 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CCDC88CQ9P219 2028 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CXorf49A8MYA2 514 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-203ENST00000468565 E7EQ34 232 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 ATP5HO75947 161 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 HBQ1P09105 142 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 PRKAR1AP10644 381 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CYP2A7P20853 494 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CNTFP26441 200 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CALRP27797 417 aaKnown RBP13.92□□□□□ -0.18
COL27A1-203ENST00000468565 RORAP35398 523 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 SKIV2L2P42285 1042 aaKnown RBP13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CCR10P46092 362 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 BDKRB1P46663 353 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CLCN7P51798 805 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 MGAT5Q09328 741 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 COL9A2Q14055 689 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-203ENST00000468565 CRYMQ14894 314 aa13.92□□□□□ -0.18
COL27A1-203ENST00000468565 TTLL9Q3SXZ7 439 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms