RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 RUNDC3AQ59EK9 446 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 XKR7Q5GH72 579 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 SHQ1Q6PI26 577 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 SLC6A13Q9NSD5 602 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 TMEM98Q9Y2Y6 226 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 FCF1Q9Y324 198 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 ARID2Q68CP9 1835 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 ANKRD66B4E2M5 251 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 ARNTLO00327 626 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 SSX4O60224 188 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 FHP07954 510 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 HNF4AP41235 474 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 CDKN2CP42773 168 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 TRIQKQ629K1 86 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 CLECL1Q8IZS7 167 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 NECTIN4Q96NY8 510 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 HEBP1Q9NRV9 189 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 NUFIP1Q9UHK0 495 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 C5orf58C9J3I9 102 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 H3BM21 787 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 KCNK2O95069 426 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 ALDH2P05091 517 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 CA5AP35218 305 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 ZNF45Q02386 682 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 TUSC3Q13454 348 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 IHHQ14623 411 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 ZNF792Q3KQV3 632 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 TSPYL5Q86VY4 417 aaPredicted RBP13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 SH3KBP1Q96B97 665 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 MS4A12Q9NXJ0 267 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 PADI3Q9ULW8 664 aa13.48□□□□□ -0.25
UBE2D3-210ENST00000453744 LOC285095A0A1B0GVY8 99 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 NT5C1B-RDH14C9J2C7 533 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PCDHGA12O60330 932 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 TRBC1P01850 177 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 CSRP3P50461 194 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ZNF57Q68EA5 555 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 KIAA1841Q6NSI8 718 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 UBE2R2Q712K3 238 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 TRIM69Q86WT6 500 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 KRT73Q86Y46 540 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ZZZ3Q8IYH5 903 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 LGI4Q8N135 537 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 C7orf57Q8NEG2 295 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 N6AMT1Q9Y5N5 214 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 LYVE1Q9Y5Y7 322 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 LZTS3O60299 673 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PRAMEF11O60813 436 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 DUSP4Q13115 394 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 CDH18Q13634 790 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 SYT6Q5T7P8 510 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 AGAP6Q5VW22 663 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 GDPD3Q7L5L3 318 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PIH1D2Q8WWB5 315 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 FCGR1BQ92637 280 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 KCNJ9Q92806 393 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 AGAP4Q96P64 663 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ZNF300Q96RE9 604 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 CRISPLD1Q9H336 500 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 FAM25AB3EWG3 89 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 FAM25CB3EWG5 89 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 FAM25GB3EWG6 89 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PTTG1O95997 202 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PDYNP01213 254 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 TYMPP19971 482 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 GKP32189 559 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 QPRTQ15274 297 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 UPP1Q16831 310 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ATG9BQ674R7 924 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 RGMBQ6NW40 437 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ERAP2Q6P179 960 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 GPR149Q86SP6 731 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 CACTIN-AS1Q8N1I8 211 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 CADM2Q8N3J6 435 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PSD2Q9BQI7 771 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 HOXD1Q9GZZ0 328 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ACTL8Q9H568 366 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 CLN6Q9NWW5 311 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ZNF639Q9UID6 485 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ABT1Q9ULW3 272 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 COL4A5P29400 1685 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 OR7A17O14581 309 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 AP3D1O14617 1153 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 MYL12BO14950 172 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 C9P02748 559 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 OLR1P78380 273 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 VMACQ2NL98 169 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 LRRC73Q5JTD7 316 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PRSS36Q5K4E3 855 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ATAD3CQ5T2N8 411 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 PLET1Q6UQ28 207 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 RBFAQ8N0V3 343 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 ZBTB2Q8N680 514 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 FBXO8Q9NRD0 319 aa13.47□□□□□ -0.25
UBE2D3-210ENST00000453744 TMEFF2Q9UIK5 374 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms