RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 TLCD1Q96CP7 247 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 FAM111AQ96PZ2 611 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 SH3GL2Q99962 352 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 DNAJC11Q9NVH1 559 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 ACTL7BQ9Y614 415 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 FREM2Q5SZK8 3169 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 STX16-NPEPL1H3BU86 382 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 H7BY64 318 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 STX16O14662 325 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 EEF1DP29692 281 aaKnown RBP23.11■■□□□ 1.29
CPSF4-207ENST00000451876 NFKB2Q00653 900 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 EIF3IQ13347 325 aaKnown RBP23.11■■□□□ 1.29
CPSF4-207ENST00000451876 CATSPEREQ5SY80 951 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 FOXR1Q6PIV2 292 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 LRRC70Q7Z2Q7 622 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 ARMC2Q8NEN0 867 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 WDR36Q8NI36 951 aaKnown RBP23.11■■□□□ 1.29
CPSF4-207ENST00000451876 ZUFSPQ96AP4 578 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 TCTN2Q96GX1 697 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 PRAP1Q96NZ9 151 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 STMN4Q9H169 189 aaPredicted RBP23.11■■□□□ 1.29
CPSF4-207ENST00000451876 PDE7BQ9NP56 450 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 OPTCQ9UBM4 332 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 TMCO1Q9UM00 188 aa23.11■■□□□ 1.29
CPSF4-207ENST00000451876 OR2A25A4D2G3 310 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 E7EQ34 232 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 K7EPI3 171 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 E2F3O00716 465 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 PLD2O14939 933 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 CTSVO60911 334 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 TAC1P20366 129 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 ATP5F1P24539 256 aaPredicted RBP23.1■■□□□ 1.29
CPSF4-207ENST00000451876 MAGOHP61326 146 aaKnown RBP23.1■■□□□ 1.29
CPSF4-207ENST00000451876 CDC16Q13042 620 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 PCBP2Q15366 365 aaKnown RBP eCLIP23.1■■□□□ 1.29
CPSF4-207ENST00000451876 PDK4Q16654 411 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 ADCK2Q7Z695 626 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 CCDC63Q8NA47 563 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 SLC5A11Q8WWX8 675 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 PMEPA1Q969W9 287 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 FCRL4Q96PJ5 515 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 PLCD4Q9BRC7 762 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 SYNPO2LQ9H987 977 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 SSU72Q9NP77 194 aaKnown RBP23.1■■□□□ 1.29
CPSF4-207ENST00000451876 ACSS2Q9NR19 701 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 AKAP7Q9P0M2 348 aaPredicted RBP23.1■■□□□ 1.29
CPSF4-207ENST00000451876 DYRK1BQ9Y463 629 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 KCNE2Q9Y6J6 123 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 NCOR2Q9Y618 2525 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 SPTBP11277 2137 aa23.1■■□□□ 1.29
CPSF4-207ENST00000451876 GPR19Q15760 415 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 TTMPQ5BVD1 217 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 ZYG11AQ6WRX3 759 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 RPS27LQ71UM5 84 aaKnown RBP23.09■■□□□ 1.29
CPSF4-207ENST00000451876 TMPRSS11BQ86T26 416 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 PAQR7Q86WK9 346 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 SNX31Q8N9S9 440 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 MOCOSQ96EN8 888 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 PRR11Q96HE9 360 aaPredicted RBP23.09■■□□□ 1.29
CPSF4-207ENST00000451876 TMEM237Q96Q45 408 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 OR6C1Q96RD1 312 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 SPNS1Q9H2V7 528 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 APMAPQ9HDC9 416 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 COPG2Q9UBF2 871 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 PISDQ9UG56 409 aa23.09■■□□□ 1.29
CPSF4-207ENST00000451876 PRAMEF4O60810 478 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 JMJD7P0C870 316 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 MYL2P10916 166 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 GABRA4P48169 554 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 MEF2AQ02078 507 aaPredicted RBP23.08■■□□□ 1.29
CPSF4-207ENST00000451876 FOXM1Q08050 763 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 MPP2Q14168 576 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 PCLAFQ15004 111 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 PRAMEF9Q5VWM5 478 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 PLD3Q8IV08 490 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 TEX9Q8N6V9 391 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 NSUN5Q96P11 429 aaKnown RBP23.08■■□□□ 1.29
CPSF4-207ENST00000451876 CHRNA10Q9GZZ6 450 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 ANKMY1Q9P2S6 941 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 PCTPQ9UKL6 214 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 TNPO3Q9Y5L0 923 aaKnown RBP23.08■■□□□ 1.29
CPSF4-207ENST00000451876 CEP295Q9C0D2 2601 aa23.08■■□□□ 1.29
CPSF4-207ENST00000451876 MED19A0JLT2 244 aaPredicted RBP23.08■■□□□ 1.28
CPSF4-207ENST00000451876 HAT1O14929 419 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 RPS17P08708 135 aaKnown RBP23.08■■□□□ 1.28
CPSF4-207ENST00000451876 CPA3P15088 417 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 GABREP78334 506 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 CSNK1G2P78368 415 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 TUBB3Q13509 450 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 AGBL2Q5U5Z8 902 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 GOLGA7Q7Z5G4 137 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 DNAJC22Q8N4W6 341 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 ABHD11Q8NFV4 315 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 RDH11Q8TC12 318 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 FGF21Q9NSA1 209 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 PILRAQ9UKJ1 303 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 SNX7Q9UNH6 387 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 NEUROG3Q9Y4Z2 214 aa23.08■■□□□ 1.28
CPSF4-207ENST00000451876 FRYQ5TBA9 3013 aa23.07■■□□□ 1.28
CPSF4-207ENST00000451876 CTSBP07858 339 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms