RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ZNF304Q9HCX3 659 aa7.44□□□□□ -1.22
LINC01961-201ENST00000449954 RCOR1Q9UKL0 485 aa7.44□□□□□ -1.22
LINC01961-201ENST00000449954 TMPRSS11EQ9UL52 423 aa7.44□□□□□ -1.22
LINC01961-201ENST00000449954 DNAJC13O75165 2243 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 A0A0G2JNJ9 132 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 FITM1A5D6W6 292 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SIGLEC16A6NMB1 481 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 A8MUI8 341 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 DNAJB6O75190 326 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SLC25A12O75746 678 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 NEURL1O76050 574 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 CYP1A1P04798 512 aaPredicted RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 CALB1P05937 261 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SHMT2P34897 504 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 ARL4AP40617 200 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 ASCL1P50553 236 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 IHHQ14623 411 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 CA9Q16790 459 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 FBXL19-AS1Q494R0 122 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 CMPK2Q5EBM0 449 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 FNBP1LQ5T0N5 605 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 ZDHHC20Q5W0Z9 365 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 PLAG1Q6DJT9 500 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 PAOXQ6QHF9 649 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 NOP9Q86U38 636 aaKnown RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 LGI4Q8N135 537 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 METTL27Q8N6F8 245 aaPredicted RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 HM13Q8TCT9 377 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 CREB3L4Q8TEY5 395 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 ROBO4Q8WZ75 1007 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SMPDL3BQ92485 455 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 FAM46AQ96IP4 442 aaKnown RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 LINC00615Q96LM1 132 aaPredicted RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 MCEEQ96PE7 176 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 OR2A14Q96R47 310 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 FERD3LQ96RJ6 166 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SRPK1Q96SB4 655 aaKnown RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SH3GL2Q99962 352 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 YIPF4Q9BSR8 244 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SNRNP25Q9BV90 132 aaKnown RBP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 GPR63Q9BZJ6 419 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 THAP2Q9H0W7 228 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 CLSTN2Q9H4D0 955 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 ANKRD10Q9NXR5 420 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.43□□□□□ -1.22
LINC01961-201ENST00000449954 Q9UFV3 132 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 SHOC2Q9UQ13 582 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 ZNF711Q9Y462 761 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 TTLL3Q9Y4R7 772 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 MAU2Q9Y6X3 613 aa7.43□□□□□ -1.22
LINC01961-201ENST00000449954 HYKKA2RU49 373 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 GABRR3A8MPY1 467 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 BCKDKO14874 412 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 PRPF4O43172 522 aaKnown RBP eCLIP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 NDUFB5O43674 189 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 SMC2O95347 1197 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 IGLV1-40P01703 118 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 HRGP04196 525 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 NEFLP07196 543 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 HEXBP07686 556 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 GLI4P10075 376 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 FBLP22087 321 aaKnown RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 THBS2P35442 1172 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 CD86P42081 329 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 NSFP46459 744 aaKnown RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ZNF165P49910 485 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 STX17P56962 302 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 KRT85P78386 507 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 SORDQ00796 357 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 PTP4A2Q12974 167 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 PNOCQ13519 176 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 FASTKQ14296 549 aaKnown RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 TAZQ16635 292 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 PDLIM3Q53GG5 364 aaPredicted RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ZC3H12BQ5HYM0 836 aaKnown RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ANKRD34AQ69YU3 496 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 DNAJC24Q6P3W2 148 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 FDX2Q6P4F2 183 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 KIF18BQ86Y91 864 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 LIX1LQ8IVB5 337 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 SLC5A8Q8N695 610 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ARRDC2Q8TBH0 407 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 MAML1Q92585 1016 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 TMEM125Q96AQ2 219 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ZNF653Q96CK0 615 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 PERPQ96FX8 193 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ZNF285Q96NJ3 590 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 HGH1Q9BTY7 390 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 BHLHE41Q9C0J9 482 aaPredicted RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ATG10Q9H0Y0 220 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 VPS16Q9H269 839 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 SIX2Q9NPC8 291 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 SMOXQ9NWM0 555 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 OR6C2Q9NZP2 312 aa7.42□□□□□ -1.22
LINC01961-201ENST00000449954 CWC15Q9P013 229 aaKnown RBP7.42□□□□□ -1.22
LINC01961-201ENST00000449954 ADAM22Q9P0K1 906 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms