RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 H0YGG7 62 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 AGPSO00116 658 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 IVDP26440 423 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 CARSP49589 748 aaKnown RBP16.9■□□□□ 0.3
DDX56-207ENST00000448192 ARF3P61204 181 aaPredicted RBP16.9■□□□□ 0.3
DDX56-207ENST00000448192 DR1Q01658 176 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 TAP2Q03519 686 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 UGT3A1Q6NUS8 523 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 ADCK2Q7Z695 626 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 PAQR7Q86WK9 346 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 HPS6Q86YV9 775 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 PDIK1LQ8N165 341 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 EFCAB3Q8N7B9 438 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 CPT1CQ8TCG5 803 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 EEF1AKMT1Q8WVE0 214 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 CFAP36Q96G28 342 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 PWWP2AQ96N64 755 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 SPSB2Q99619 263 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 SMAD5Q99717 465 aaKnown RBP16.9■□□□□ 0.3
DDX56-207ENST00000448192 SLC26A1Q9H2B4 701 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 UTP6Q9NYH9 597 aaKnown RBP16.9■□□□□ 0.3
DDX56-207ENST00000448192 LUZP4Q9P127 313 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 ANKMY1Q9P2S6 941 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 SAR1BQ9Y6B6 198 aa16.9■□□□□ 0.3
DDX56-207ENST00000448192 COL12A1Q99715 3063 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 PRRC2CQ9Y520 2896 aaKnown RBP16.89■□□□□ 0.29
DDX56-207ENST00000448192 MMP11P24347 488 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 GABRB3P28472 473 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 SKIV2L2P42285 1042 aaKnown RBP16.89■□□□□ 0.29
DDX56-207ENST00000448192 RGS4P49798 205 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 MYBPC3Q14896 1274 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 MORF4L2Q15014 288 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 MUM1Q2TAK8 710 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 RBM20Q5T481 1227 aaKnown RBP16.89■□□□□ 0.29
DDX56-207ENST00000448192 VWA5B1Q5TIE3 1220 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 JMJD6Q6NYC1 403 aaPredicted RBP16.89■□□□□ 0.29
DDX56-207ENST00000448192 PRMT9Q6P2P2 845 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 SYDE1Q6ZW31 735 aaPredicted RBP16.89■□□□□ 0.29
DDX56-207ENST00000448192 CREG2Q8IUH2 290 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 PALM2Q8IXS6 379 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 CSNK1A1LQ8N752 337 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 CERS2Q96G23 380 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 NAPGQ99747 312 aaPredicted RBP16.89■□□□□ 0.29
DDX56-207ENST00000448192 ATP13A2Q9NQ11 1180 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 SLAMF7Q9NQ25 335 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 TAS2R13Q9NYV9 303 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 FBXL4Q9UKA2 621 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 NXT1Q9UKK6 140 aaKnown RBP16.89■□□□□ 0.29
DDX56-207ENST00000448192 ADAMTS6Q9UKP5 1117 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 CHMP2BQ9UQN3 213 aa16.89■□□□□ 0.29
DDX56-207ENST00000448192 EIF3FO00303 357 aaPredicted RBP16.88■□□□□ 0.29
DDX56-207ENST00000448192 ALOX12BO75342 701 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 AHSGP02765 367 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 ALPPP05187 535 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 FBLP22087 321 aaKnown RBP16.88■□□□□ 0.29
DDX56-207ENST00000448192 IMPA1P29218 277 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 ELK3P41970 407 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 CD97P48960 835 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 ABATP80404 500 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 TIAL1Q01085 375 aaKnown RBP eCLIP16.88■□□□□ 0.29
DDX56-207ENST00000448192 OCA2Q04671 838 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 RBBP7Q16576 425 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 HKDC1Q2TB90 917 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 PRTGQ2VWP7 1150 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 ZNF425Q6IV72 752 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 LRRC8EQ6NSJ5 796 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 PAQR3Q6TCH7 311 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 PRSS58Q8IYP2 241 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 RBMXL3Q8N7X1 1067 aaKnown RBP16.88■□□□□ 0.29
DDX56-207ENST00000448192 MCOLN3Q8TDD5 553 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 RERGQ96A58 199 aaPredicted RBP16.88■□□□□ 0.29
DDX56-207ENST00000448192 NACC2Q96BF6 587 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 C10orf90Q96M02 699 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 RUNDC3BQ96NL0 473 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 TRIM51Q9BSJ1 452 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 YIPF2Q9BWQ6 316 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 SYNPO2LQ9H987 977 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 CUEDC1Q9NWM3 386 aaPredicted RBP16.88■□□□□ 0.29
DDX56-207ENST00000448192 C5AR2Q9P296 337 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 SLC17A6Q9P2U8 582 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 PYCARDQ9ULZ3 195 aa16.88■□□□□ 0.29
DDX56-207ENST00000448192 RUVBL1Q9Y265 456 aaKnown RBP16.88■□□□□ 0.29
DDX56-207ENST00000448192 SOCS6O14544 535 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 TTI1O43156 1089 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 KLHL41O60662 606 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 VPS4BO75351 444 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 SORBS2O94875 1100 aaKnown RBP16.87■□□□□ 0.29
DDX56-207ENST00000448192 EZRP15311 586 aaKnown RBP16.87■□□□□ 0.29
DDX56-207ENST00000448192 ITGA3P26006 1051 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 PAFAH1B1P43034 410 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 CDKN2DP55273 166 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 AIMP2Q13155 320 aaKnown RBP16.87■□□□□ 0.29
DDX56-207ENST00000448192 HIF1AQ16665 826 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 SLC6A19Q695T7 634 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 KIAA0408Q6ZU52 694 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 PLD3Q8IV08 490 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 CNTN4Q8IWV2 1026 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 LRRC56Q8IYG6 542 aaPredicted RBP16.87■□□□□ 0.29
DDX56-207ENST00000448192 MYO1HQ8N1T3 1032 aa16.87■□□□□ 0.29
DDX56-207ENST00000448192 STT3BQ8TCJ2 826 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms