RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 OR2L3Q8NG85 312 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 OR2A1Q8NGT9 310 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 N4BP2L2Q92802 583 aaPredicted RBP11.16□□□□□ -0.62
LINC00408-201ENST00000447784 ARL8AQ96BM9 186 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 TLCD1Q96CP7 247 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 PRR11Q96HE9 360 aaPredicted RBP11.16□□□□□ -0.62
LINC00408-201ENST00000447784 CCDC74BQ96LY2 380 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 SLC46A1Q96NT5 459 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 FAM111AQ96PZ2 611 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 MAP3K3Q99759 626 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 CMKLR1Q99788 373 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 SH3GL2Q99962 352 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 SELENOSQ9BQE4 189 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 SGPP1Q9BX95 441 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 PRM3Q9NNZ6 103 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 ASCL3Q9NQ33 180 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 THSD1Q9NS62 852 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 TMEM9Q9P0T7 183 aa11.16□□□□□ -0.62
LINC00408-201ENST00000447784 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
LINC00408-201ENST00000447784 A0A1W2PPV9 198 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 SLC9B1P1A6NJY1 282 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 A8MT66 165 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 CDRT15L2A8MXV6 281 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 K7EPI3 171 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PLD2O14939 933 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PRPF4O43172 522 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 TYROBPO43914 113 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 KLK8O60259 260 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 DLX3O60479 287 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 H2AFYO75367 372 aaKnown RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 KATNA1O75449 491 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 ANKRD34CP0C6C1 535 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 THRAP10827 490 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 CREB1P16220 341 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 EPB42P16452 691 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 NPPBP16860 134 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 GNAZP19086 355 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PSMB5P28074 263 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 RBMS1P29558 406 aaKnown RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 EEF1DP29692 281 aaKnown RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 HPDP32754 393 aaPredicted RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 GRK3P35626 688 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 ARL1P40616 181 aaPredicted RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 SLC6A12P48065 614 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 SEPHS1P49903 392 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 CCR8P51685 355 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PRKAA2P54646 552 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PPP1CAP62136 330 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 HSD11B2P80365 405 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 CDC16Q13042 620 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PCBP2Q15366 365 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 C18orf21Q32NC0 220 aaPredicted RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 FBXO48Q5FWF7 155 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 HHATQ5VTY9 493 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 CYB5D1Q6P9G0 228 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 ZNF574Q6ZN55 896 aaPredicted RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 RAB11FIP2Q7L804 512 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 LRRC56Q8IYG6 542 aaPredicted RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 TEX9Q8N6V9 391 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 CCNYL1Q8N7R7 359 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 AGBL5Q8NDL9 886 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 ZNF248Q8NDW4 579 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PPP1R14CQ8TAE6 165 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 UBTD2Q8WUN7 234 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 SLC5A11Q8WWX8 675 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 ATP6V1E2Q96A05 226 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 ZUFSPQ96AP4 578 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 ESAMQ96AP7 390 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 TCTN2Q96GX1 697 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PAIP2Q9BPZ3 127 aaKnown RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 TMEM79Q9BSE2 394 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PITPNM3Q9BZ71 974 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 KLHL25Q9H0H3 589 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 C12orf65Q9H3J6 166 aaKnown RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PDE7BQ9NP56 450 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 GPRC5BQ9NZH0 403 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 PDP2Q9P2J9 529 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 SLC17A7Q9P2U7 560 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 COPG2Q9UBF2 871 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 EMCNQ9ULC0 261 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 DMXL2Q8TDJ6 3036 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.62
LINC00408-201ENST00000447784 USP24Q9UPU5 2620 aa11.15□□□□□ -0.62
LINC00408-201ENST00000447784 WDFY3Q8IZQ1 3526 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 TDRD6O60522 2096 aaKnown RBP11.14□□□□□ -0.63
LINC00408-201ENST00000447784 TMEM120BA0PK00 339 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 TARM1B6A8C7 271 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 AGRPO00253 132 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 HGSO14964 777 aaPredicted RBP11.14□□□□□ -0.63
LINC00408-201ENST00000447784 PRICKLE3O43900 615 aaPredicted RBP11.14□□□□□ -0.63
LINC00408-201ENST00000447784 SUPT7LO94864 414 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 PVRP15151 417 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 IMPDH1P20839 514 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 MAGP20916 626 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 PEBP1P30086 187 aaKnown RBP11.14□□□□□ -0.63
LINC00408-201ENST00000447784 GRIA3P42263 894 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 AGTR2P50052 363 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 PCBP4P57723 403 aaKnown RBP11.14□□□□□ -0.63
LINC00408-201ENST00000447784 HERVK_113P63132 956 aa11.14□□□□□ -0.63
LINC00408-201ENST00000447784 NFKB2Q00653 900 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms