RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZNF157P51786 506 aaPredicted RBP18.66■□□□□ 0.58
HMGA1-205ENST00000447654 GLYR1Q49A26 553 aaPredicted RBP18.66■□□□□ 0.58
HMGA1-205ENST00000447654 ATP6AP1LQ52LC2 224 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 SNX20Q7Z614 316 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 OR8H3Q8N146 312 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 COQ8BQ96D53 544 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 ZFP42Q96MM3 310 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 KCNS3Q9BQ31 491 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 TBCDQ9BTW9 1192 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 TRIM45Q9H8W5 580 aaPredicted RBP18.66■□□□□ 0.58
HMGA1-205ENST00000447654 NMRK2Q9NPI5 230 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 PHF11Q9UIL8 331 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 UBQLN1Q9UMX0 589 aaKnown RBP18.66■□□□□ 0.58
HMGA1-205ENST00000447654 IQCMA0A1B0GVH7 501 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 CXCR6O00574 342 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 DCLK1O15075 740 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 PAHP00439 452 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 IFNA7P01567 189 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 AP1S2P56377 157 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 MTPNP58546 118 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 PSPHP78330 225 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 UBE3AQ05086 875 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 XKR4Q5GH76 650 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 GPR139Q6DWJ6 353 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 DET1Q7L5Y6 550 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 C16orf62Q7Z3J2 963 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 GALNT5Q7Z7M9 940 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 ISCA2Q86U28 154 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 RNF135Q8IUD6 432 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 TAGAPQ8N103 731 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 GHDCQ8N2G8 530 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 TRPV1Q8NER1 839 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 APH1BQ8WW43 257 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 WNT8BQ93098 351 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 ITCHQ96J02 903 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 BBS2Q9BXC9 721 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 ABCB8Q9NUT2 735 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 TMEM39AQ9NV64 488 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 PTGDR2Q9Y5Y4 395 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 ALG5Q9Y673 324 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 FAM170BA6NMN3 283 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 CLCA1A8K7I4 914 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 WASH4PA8MWX3 477 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 TSPAN8P19075 237 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 ZP3P21754 424 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 TPMTP51580 245 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PURAQ00577 322 aaKnown RBP18.65■□□□□ 0.58
HMGA1-205ENST00000447654 CDC42EP1Q00587 391 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 LCP2Q13094 533 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 GNASQ5JWF2 1037 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 STX19Q8N4C7 294 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 C3orf58Q8NDZ4 430 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 DNASE1L2Q92874 299 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 SECISBP2Q96T21 854 aaKnown RBP18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PRKD2Q9BZL6 878 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 SLC6A17Q9H1V8 727 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 IFT46Q9NQC8 304 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 COQ3Q9NZJ6 369 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 SPASTQ9UBP0 616 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 U3KQV3 271 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PTGESO14684 152 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 SLC43A1O75387 559 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 RAF1P04049 648 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 NFKB1P19838 968 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PON2Q15165 354 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 HABP4Q5JVS0 413 aaKnown RBP18.65■□□□□ 0.58
HMGA1-205ENST00000447654 ARHGAP17Q68EM7 881 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PYROXD2Q8N2H3 581 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 DNAJC22Q8N4W6 341 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PROKR1Q8TCW9 393 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 GPR151Q8TDV0 419 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PPM1MQ96MI6 270 aa18.65■□□□□ 0.58
HMGA1-205ENST00000447654 USB1Q9BQ65 265 aaKnown RBP18.65■□□□□ 0.58
HMGA1-205ENST00000447654 AAR2Q9Y312 384 aaKnown RBP18.65■□□□□ 0.58
HMGA1-205ENST00000447654 PPP6CO00743 305 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 PCDHGA12O60330 932 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 CACNG3O60359 315 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 TNFRSF21O75509 655 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 WDR47O94967 919 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 RPS17P08708 135 aaKnown RBP18.64■□□□□ 0.57
HMGA1-205ENST00000447654 LCP1P13796 627 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 KCNE1P15382 129 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 FPR1P21462 350 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 RPS3P23396 243 aaKnown RBP eCLIP18.64■□□□□ 0.571e-11■■□□□ 11.4
HMGA1-205ENST00000447654 HOXC8P31273 242 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 DNAJA1P31689 397 aaKnown RBP18.64■□□□□ 0.57
HMGA1-205ENST00000447654 RORCP51449 518 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 FOXA1P55317 472 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 ARPP19P56211 112 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 MZT2BQ6NZ67 158 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 UNC93AQ86WB7 457 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 CRYBG2Q8N1P7 616 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 VPS37AQ8NEZ2 397 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 FBXW5Q969U6 566 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 HTATIP2Q9BUP3 242 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 ALG9Q9H6U8 611 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 RNF167Q9H6Y7 350 aa18.64■□□□□ 0.57
HMGA1-205ENST00000447654 RANBP3Q9H6Z4 567 aaPredicted RBP18.64■□□□□ 0.57
HMGA1-205ENST00000447654 ING4Q9UNL4 249 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms