RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 C1GALT1C1LP0DN25 315 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 PCNAP12004 261 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CDH1P12830 882 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 SLC2A4P14672 509 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 NME1P15531 152 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 PSMB5P28074 263 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 SHMT2P34897 504 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 SLC19A1P41440 591 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CASP2P42575 452 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CSNK1EP49674 416 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 DIO3P55073 304 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 NME5P56597 212 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 RPL38P63173 70 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CSTF1Q05048 431 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 SLBPQ14493 270 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 NAA25Q14CX7 972 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 ELOCQ15369 112 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 GSTA3Q16772 222 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 HIST2H2ACQ16777 129 aaPredicted RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 HIST2H2AA3Q6FI13 130 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 MED27Q6P2C8 311 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 IYDQ6PHW0 289 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 LONP2Q86WA8 852 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 SNX32Q86XE0 403 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 C1orf210Q8IVY1 113 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 MIER2Q8N344 545 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 KIF2BQ8N4N8 673 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 FAM46DQ8NEK8 389 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 C1orf216Q8TAB5 229 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 HMGCLL1Q8TB92 370 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 JPH3Q8WXH2 748 aaPredicted RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 MTERF1Q99551 399 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 ACPTQ9BZG2 426 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 LRMDAQ9H2I8 198 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CCDC167Q9P0B6 97 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CCL27Q9Y4X3 112 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CACNA1EQ15878 2313 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 CABIN1Q9Y6J0 2220 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 KIR2DS5A0A0G2JLQ3 304 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 A0A0G2JNG1 304 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 A0A1W2PPV9 198 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 PIPSLA2A3N6 862 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 B2RBV5 119 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 KIR2DS3K7RE56 304 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 VILLO15195 856 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 SEC22BO75396 215 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 ATP6V1G2O95670 118 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 THRAP10827 490 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 COX4I1P13073 169 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRDX6P30041 224 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 ATP4BP51164 291 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 NXPH1P58417 271 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 RIPK1Q13546 671 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 LAPTM5Q13571 262 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 CYLC2Q14093 348 aaPredicted RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 KIR2DS5Q14953 304 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 AGKQ53H12 422 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 LYSMD4Q5XG99 296 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 WDR5BQ86VZ2 330 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 AMIGO1Q86WK6 493 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR7G3Q8NG95 312 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR4E2Q8NGC2 313 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 PATE1Q8WXA2 126 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 WDR34Q96EX3 536 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 MS4A3Q96HJ5 214 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 SRMSQ9H3Y6 488 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 LRTM1Q9HBL6 345 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 AIG1Q9NVV5 245 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 C1orf109Q9NX04 203 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR6C2Q9NZP2 312 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 CPNE7Q9UBL6 633 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 PCDHB11Q9Y5F2 797 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR5K4A6NMS3 321 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 B4DGG1 531 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 GYG2O15488 501 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 TDGF1P13385 188 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 PTPN4P29074 926 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 CCR8P51685 355 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 YBX1P67809 324 aaKnown RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 IRX1P78414 480 aaPredicted RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 MEF2AQ02078 507 aaPredicted RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 EMX2Q04743 252 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 ZNF33BQ06732 778 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 CSTF3Q12996 717 aaKnown RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 SRSF5Q13243 272 aaKnown RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 MAD2L1Q13257 205 aaPredicted RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 E2F2Q14209 437 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 GPR18Q14330 331 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 MAPRE2Q15555 327 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 TEAD4Q15561 434 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 RFTN2Q52LD8 501 aaPredicted RBP9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 ASRGL1Q7L266 308 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 ADCK2Q7Z695 626 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 C11orf74Q86VG3 221 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 KRT78Q8N1N4 520 aa9.16□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR9I1Q8NGQ6 314 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms