RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ZNF225Q9UK10 706 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ANGPTL2Q9UKU9 493 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 IFT52Q9Y366 437 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 GPSM3Q9Y4H4 160 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 HS3ST3A1Q9Y663 406 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ARHGAP10A1A4S6 786 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 KRT87PA6NCN2 255 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 C10orf142B7Z368 130 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 OR7A17O14581 309 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 TOR1BO14657 336 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 AQP9O43315 295 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SLC16A8O95907 504 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 RPN2P04844 631 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 RPS9P46781 194 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 GNPDA1P46926 289 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CDC16Q13042 620 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 TBCCQ15814 346 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CCSMST1Q4G0I0 132 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 LETMD1Q6P1Q0 360 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 AGTRAPQ6RW13 159 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 UGT2A3Q6UWM9 527 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ENPP7Q6UWV6 458 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 GCNT7Q6ZNI0 430 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 DDIASQ8IXT1 998 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 GJD3Q8N144 294 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CHCHD4Q8N4Q1 142 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 DCBLD1Q8N8Z6 715 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 TMEM145Q8NBT3 493 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 OR4F6Q8NGB9 312 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 LILRB4Q8NHJ6 448 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ZFP28Q8NHY6 868 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 METTL6Q8TCB7 284 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ACTRT2Q8TDY3 377 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 TFGQ92734 400 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PYCR2Q96C36 320 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 BIRC7Q96CA5 298 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SCARF2Q96GP6 870 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PRR11Q96HE9 360 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PKP4Q99569 1192 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 TUBB6Q9BUF5 446 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ZDHHC5Q9C0B5 715 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CARS2Q9HA77 564 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 MRPL40Q9NQ50 206 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 DNAJC11Q9NVH1 559 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 STOX2Q9P2F5 926 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 MUTYHQ9UIF7 546 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PSMD13Q9UNM6 376 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SIT1Q9Y3P8 196 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 IGHV1OR15-9A0A0B4J2B8 117 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PRSS38A1L453 326 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CENPBD1B2RD01 187 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PIP5K1BO14986 540 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PXNP49023 591 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 EIF2B2P49770 351 aaKnown RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CLCNKAP51800 687 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CHRNEQ04844 493 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 TRAF3Q13114 568 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ZXDCQ2QGD7 858 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CAMKK1Q8N5S9 505 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 METTL25Q8N6Q8 603 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 SNX31Q8N9S9 440 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 TOR1AIP2Q8NFQ8 470 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 RAD51AP1Q96B01 352 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 OR2M4Q96R27 311 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 MIPEPQ99797 713 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 NTMT1Q9BV86 223 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 EHD1Q9H4M9 534 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ACTR8Q9H981 624 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 KCNK6Q9Y257 313 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 SLC22A14Q9Y267 594 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PCDHGA11Q9Y5H2 935 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 TNFRSF10CO14798 259 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ENO1P06733 434 aaKnown RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CAPN1P07384 714 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 EBLN1P0CF75 366 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 CDH3P22223 829 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 IDSP22304 550 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ITPKAP23677 461 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 RPL10P27635 214 aaKnown RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 RABIFP47224 123 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 NAE1Q13564 534 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 KCNJ8Q15842 424 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 IZUMO2Q6UXV1 221 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PDSS2Q86YH6 399 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 DCUN1D3Q8IWE4 304 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 SYTL1Q8IYJ3 562 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 FAM160A2Q8N612 972 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 OR9A1PQ8NGU1 263 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 OR1E3Q8WZA6 343 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 VMP1Q96GC9 406 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 GPATCH1Q9BRR8 931 aaKnown RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 PALMDQ9NP74 551 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 BTRCQ9Y297 605 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-201ENST00000442201 LINC00854A0A1B0GVQ3 168 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ATP6AP2A0A1C7CYW4 349 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 DCXO43602 365 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 NDUFS2O75306 463 aa7.83□□□□□ -1.16
CCDC39-201ENST00000442201 ATP6AP2O75787 350 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms