RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CARSP49589 748 aaKnown RBP18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 ITGA8P53708 1063 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 CDKN2DP55273 166 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 RELAQ04206 551 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 IGFBP7Q16270 282 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 UBE2R2Q712K3 238 aaPredicted RBP18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 PDIK1LQ8N165 341 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 EEF1AKMT1Q8WVE0 214 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 SMAD5Q99717 465 aaKnown RBP18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 P4HTMQ9NXG6 502 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 RNF14Q9UBS8 474 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 ZC3H7BQ9UGR2 993 aaKnown RBP18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 TRMT6Q9UJA5 497 aaKnown RBP18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 ADAMTS6Q9UKP5 1117 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 CHMP2BQ9UQN3 213 aa18.07■□□□□ 0.48
HMGB3P22-201ENST00000442010 DOPEY2Q9Y3R5 2298 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 RP1L1Q8IWN7 2480 aaPredicted RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 FLNCQ14315 2725 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 VSTM2BA6NLU5 285 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 H0YGG7 62 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 SYF2O95926 243 aaKnown RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 PIM1P11309 404 aaPredicted RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 EMP3P54852 163 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 ARF3P61204 181 aaPredicted RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 CBLBQ13191 982 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 FRG1Q14331 258 aaKnown RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 DCAF10Q5QP82 559 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 HP1BP3Q5SSJ5 553 aaPredicted RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 LRRC8EQ6NSJ5 796 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 UGT3A1Q6NUS8 523 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 TRMT10BQ6PF06 316 aaKnown RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 PAQR3Q6TCH7 311 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 ARHGEF39Q8N4T4 335 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 GABPB2Q8TAK5 448 aaPredicted RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 MIB2Q96AX9 1013 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 NACC2Q96BF6 587 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 LRRC39Q96DD0 335 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 C10orf90Q96M02 699 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 OR2A5Q96R48 311 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 TAS2R13Q9NYV9 303 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 PDE10AQ9Y233 779 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 ZNF451Q9Y4E5 1061 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 SETXQ7Z333 2677 aaKnown RBP18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 SCN3AQ9NY46 2000 aa18.06■□□□□ 0.48
HMGB3P22-201ENST00000442010 CCNDBP1O95273 360 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 TSPAN12O95859 305 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 MMP11P24347 488 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 SOX8P57073 446 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 ABATP80404 500 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 TSTA3Q13630 321 aaPredicted RBP18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 HIF1AQ16665 826 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 NADK2Q4G0N4 442 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 METTL27Q8N6F8 245 aaPredicted RBP18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 SNF8Q96H20 258 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 FER1L6-AS2Q96M78 137 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 CUEDC1Q9NWM3 386 aaPredicted RBP18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 GPR83Q9NYM4 423 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 STOX2Q9P2F5 926 aaPredicted RBP18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 CTSFQ9UBX1 484 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 MAU2Q9Y6X3 613 aa18.05■□□□□ 0.48
HMGB3P22-201ENST00000442010 A6NL46 340 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 E7ESA3 106 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 AGPSO00116 658 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 MASP2O00187 686 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 SOCS6O14544 535 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 C8GP07360 202 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 EZRP15311 586 aaKnown RBP18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 PAFAH1B1P43034 410 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 CD97P48960 835 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 MLLT10P55197 1068 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 SP140Q13342 867 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 PRMT9Q6P2P2 845 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 CFAP36Q96G28 342 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 CCDC138Q96M89 665 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 ZNF304Q9HCX3 659 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 NXT1Q9UKK6 140 aaKnown RBP18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 RUVBL1Q9Y265 456 aaKnown RBP18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 PTPN13Q12923 2485 aa18.04■□□□□ 0.48
HMGB3P22-201ENST00000442010 IGLV3-12A0A075B6K2 115 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 PEX12O00623 359 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 SLC16A5O15375 505 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 SORBS2O94875 1100 aaKnown RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 IGHEP01854 428 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 EIF2S1P05198 315 aaKnown RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 FDXRP22570 491 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 RPL21P46778 160 aaKnown RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 RGS4P49798 205 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 PGGT1BP53609 377 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 ARL4CP56559 192 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 ZXDCQ2QGD7 858 aaPredicted RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 MUM1Q2TAK8 710 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 HKDC1Q2TB90 917 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 HECTD2Q5U5R9 776 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 MBOAT1Q6ZNC8 495 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 HPS6Q86YV9 775 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 GALNT16Q8N428 558 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 RBMXL3Q8N7X1 1067 aaKnown RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 MCOLN3Q8TDD5 553 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 KRT12Q99456 494 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 TRIM31Q9BZY9 425 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms