RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ACTR8Q9H981 624 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 B3GNT2Q9NY97 397 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 RIMKLBQ9ULI2 386 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 PCDHB5Q9Y5E4 795 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 PSIP1O75475 530 aaKnown RBP15.38■□□□□ 0.05
DHFR-201ENST00000439211 FGF1P05230 155 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 C16orf59Q7L2K0 433 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 CHMP1BQ7LBR1 199 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 ATP13A1Q9HD20 1204 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 MAGEL2Q9UJ55 1249 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 USP22Q9UPT9 525 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 ACTL7AQ9Y615 435 aa15.38■□□□□ 0.05
DHFR-201ENST00000439211 NIPSNAP2O75323 286 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 CD1DP15813 335 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 HLA-DPA1P20036 260 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 TALDO1P37837 337 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ERVK-8P63133 956 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 MED22Q15528 200 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 BHLHB9Q6PI77 547 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 FUNDC1Q8IVP5 155 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 PELI3Q8N2H9 469 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ZNF300Q96RE9 604 aaPredicted RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 DNAJB9Q9UBS3 223 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ADGRE2Q9UHX3 823 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 HHLA1C9JL84 531 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ECI2O75521 394 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 AKR1A1P14550 325 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 TCF3P15923 654 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 DNAJB1P25685 340 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 SOX9P48436 509 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 MVKQ03426 396 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 SIDT2Q8NBJ9 832 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 MTFMTQ96DP5 389 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 CDKN2AIPNLQ96HQ2 116 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 CAPN5O15484 640 aaPredicted RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 HTR1AP08908 422 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 COL6A1P12109 1028 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 DGKQP52824 942 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ERVFC1P60507 584 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 SRP54P61011 504 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 PRKCDQ05655 676 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 RPA4Q13156 261 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 SMN1Q16637 294 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 RFX4Q33E94 735 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 MS4A13Q5J8X5 152 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ANKRD34AQ69YU3 496 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 GDF6Q6KF10 455 aaPredicted RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 TMEM207Q6UWW9 146 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 SCD5Q86SK9 330 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ZNF431Q8TF32 576 aaPredicted RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 IGSF8Q969P0 613 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 SLC47A1Q96FL8 570 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 FAM129BQ96TA1 746 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 DPCDQ9BVM2 203 aaPredicted RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 KATNBL1Q9H079 304 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 MUC13Q9H3R2 512 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 TLR8Q9NR97 1041 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 GMEB2Q9UKD1 530 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 MOXD2PA6NHM9 499 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 TULP3O75386 442 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 ZNF682O95780 498 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 PAHP00439 452 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 CNPP09543 421 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 PRDX3P30048 256 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 ADRA1AP35348 466 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 MXD1Q05195 221 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 CYP27C1Q4G0S4 372 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 FLYWCH1Q4VC44 716 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 SOWAHCQ53LP3 525 aaPredicted RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 MSANTD2Q6P1R3 559 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 CREB3L2Q70SY1 520 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 RBM23Q86U06 439 aaKnown RBP15.37■□□□□ 0.05
DHFR-201ENST00000439211 POF1BQ8WVV4 589 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 DIRAS2Q96HU8 199 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 LIN7BQ9HAP6 207 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 PCDHB16Q9NRJ7 776 aa15.37■□□□□ 0.05
DHFR-201ENST00000439211 A0A0U1RQS6 177 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 GPX3P22352 226 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 F8A1P23610 371 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 PSMD8P48556 350 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 CTAG1AP78358 180 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 ZNF57Q68EA5 555 aaPredicted RBP15.36■□□□□ 0.05
DHFR-201ENST00000439211 KDELC1Q6UW63 502 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 LRRC17Q8N6Y2 441 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 USB1Q9BQ65 265 aaKnown RBP15.36■□□□□ 0.05
DHFR-201ENST00000439211 MRM3Q9HC36 420 aaKnown RBP15.36■□□□□ 0.05
DHFR-201ENST00000439211 IL1RAPQ9NPH3 570 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 IFT46Q9NQC8 304 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 INTS7Q9NVH2 962 aaKnown RBP15.36■□□□□ 0.05
DHFR-201ENST00000439211 A0A1W2PQ09 198 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 IQCF5A8MTL0 148 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 VPS4BO75351 444 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 MC4RP32245 332 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 IDH2P48735 452 aaKnown RBP15.36■□□□□ 0.05
DHFR-201ENST00000439211 GDI2P50395 445 aaKnown RBP15.36■□□□□ 0.05
DHFR-201ENST00000439211 OR4D2P58180 307 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 RPL38P63173 70 aaKnown RBP15.36■□□□□ 0.05
DHFR-201ENST00000439211 KRT73Q86Y46 540 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 SH3RF2Q8TEC5 729 aa15.36■□□□□ 0.05
DHFR-201ENST00000439211 DNAJA4Q8WW22 397 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms