RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NPY6RQ99463 290 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 H2AFJQ9BTM1 129 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SPATC1LQ9H0A9 340 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SIK2Q9H0K1 926 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MAGT1Q9H0U3 335 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TSPYL1Q9H0U9 437 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SIRPDQ9H106 197 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PPIL3Q9H2H8 161 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 TMEM245Q9H330 911 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SMOC2Q9H3U7 446 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 AUNIPQ9H7T9 357 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CXorf36Q9H7Y0 433 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 UPF2Q9HAU5 1272 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 PCDH9Q9HC56 1237 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 NEK6Q9HC98 313 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 VAT1LQ9HCJ6 419 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MRPL47Q9HD33 250 aaKnown RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZDHHC18Q9NUE0 388 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SEMA5BQ9P283 1151 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC17A6Q9P2U8 582 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 ONECUT1Q9UBC0 465 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 COPG2Q9UBF2 871 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 UXTQ9UBK9 157 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MGAT4CQ9UBM8 478 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CTSFQ9UBX1 484 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC24A2Q9UI40 661 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 CRLS1Q9UJA2 301 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 DTX4Q9Y2E6 619 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 RNF215Q9Y6U7 377 aa3.5□□□□□ -1.85
HMGB1P12-201ENST00000438594 MEX3AA1L020 520 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 TMEM221A6NGB7 291 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 KLRF2D3W0D1 207 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 POLR1CO15160 346 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF208O43345 1280 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PEX1O43933 1283 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 HBP1O60381 514 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CCNT1O60563 726 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CDH16O75309 829 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 VPS26AO75436 327 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 WDR47O94967 919 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 AGFG2O95081 481 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CAVIN2O95810 425 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 LDLRP01130 860 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 APOA1P02647 267 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ATXN1LP0C7T5 689 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PLA2G4BP0C869 781 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 MYZAPP0CAP1 466 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CYP4B1P13584 511 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ANXA7P20073 488 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PTNP21246 168 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRPH2P23942 346 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 NMT1P30419 496 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 LRPAP1P30533 357 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 LCN1P31025 176 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 HOXC9P31274 260 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ADRA1AP35348 466 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 RORAP35398 523 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 GJC1P36383 396 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ETV5P41161 510 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 FNTAP49354 379 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC26A2P50443 739 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CCR4P51679 360 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 RPS6KA3P51812 740 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ARHGDIAP52565 204 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRKAG1P54619 331 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 SELENOVP59797 346 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 RAP2BP61225 183 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CNTN2Q02246 1040 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 HSF2Q03933 536 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 FOLH1Q04609 750 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 EGR4Q05215 589 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRKAA1Q13131 559 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 SEMA3BQ13214 749 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 TNK1Q13470 666 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ALKBH1Q13686 389 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 MVPQ14764 893 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 NAB2Q15742 525 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 MAPK6Q16659 721 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PCK2Q16822 640 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CCDC14Q49A88 953 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM98BQ52LJ0 330 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF311Q5JNZ3 666 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CCNYL2Q5T2Q4 361 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 LRIF1Q5T3J3 769 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 SERTAD4-AS1Q5TG53 156 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 LCN1P1Q5VSP4 162 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 LRRC38Q5VT99 294 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 CLEC6AQ6EIG7 209 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 PTRHD1Q6GMV3 140 aaKnown RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF529Q6P280 563 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRIM65Q6PJ69 517 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF704Q6ZNC4 412 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF788Q6ZQV5 615 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 MOB3CQ70IA8 216 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRILQ7L0X0 811 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ADGRD2Q7Z7M1 963 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 LDB1Q86U70 411 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 ECHDC2Q86YB7 292 aa3.49□□□□□ -1.85
HMGB1P12-201ENST00000438594 FOXP4Q8IVH2 680 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms