RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ARL2BPQ9Y2Y0 163 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 LAMA1P25391 3075 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 RHPN2P1A8MT19 583 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 ZNF883P0CG24 379 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 CDH1P12830 882 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 GLB1P16278 677 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 POLR2CP19387 275 aaPredicted RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 VARSP26640 1264 aaKnown RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 LAPTM5Q13571 262 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 PAGE2BQ5JRK9 111 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 VWA5B1Q5TIE3 1220 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 KLHL35Q6PF15 583 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 RNF165Q6ZSG1 346 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 CACNA2D3Q8IZS8 1091 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 ABHD11Q8NFV4 315 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 OR2L3Q8NG85 312 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 CCT7Q99832 543 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 IRF2BPLQ9H1B7 796 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 MEAF6Q9HAF1 191 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 MRPS30Q9NP92 439 aaKnown RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 HRASLS2Q9NWW9 162 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 LRIT1Q9P2V4 623 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 SNX6Q9UNH7 406 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 RNF215Q9Y6U7 377 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 OR5K3A6NET4 321 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 C2orf74A8MZ97 194 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 TRIM38O00635 465 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 FFAR3O14843 346 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 GPR42O15529 346 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 DIAPH2O60879 1101 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 UBXN7O94888 489 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 KRT6AP02538 564 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 KRT6BP04259 564 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 CMPK1P30085 196 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 KRT6CP48668 564 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 IDH3AP50213 366 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 EPHA4P54764 986 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 YBX1P67809 324 aaKnown RBP22.16■■□□□ 1.14
CPSF4-204ENST00000436336 ZRSR2Q15696 482 aaKnown RBP22.16■■□□□ 1.14
CPSF4-204ENST00000436336 TCHHL1Q5QJ38 904 aaPredicted RBP22.16■■□□□ 1.14
CPSF4-204ENST00000436336 FAM181AQ8N9Y4 354 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 FLVCR1-AS1Q8TAF5 88 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 C19orf60Q96EN9 201 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 EBF4Q9BQW3 602 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 TUBB1Q9H4B7 451 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 CUEDC1Q9NWM3 386 aaPredicted RBP22.16■■□□□ 1.14
CPSF4-204ENST00000436336 ACTR10Q9NZ32 417 aa22.16■■□□□ 1.14
CPSF4-204ENST00000436336 GSAPA4D1B5 854 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 H0YIV9 168 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 PIP5K1BO14986 540 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 CCR8P51685 355 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 SLC9B1Q4ZJI4 515 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 ZNF438Q7Z4V0 828 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 FAM129CQ86XR2 697 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 DDIASQ8IXT1 998 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 ANKS4BQ8N8V4 417 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 OR4K1Q8NGD4 311 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 USP7Q93009 1102 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 MAELQ96JY0 434 aaKnown RBP22.15■■□□□ 1.14
CPSF4-204ENST00000436336 OR2A14Q96R47 310 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 ELOVL6Q9H5J4 265 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 GEMIN8Q9NWZ8 242 aaKnown RBP22.15■■□□□ 1.14
CPSF4-204ENST00000436336 PCDHGA11Q9Y5H2 935 aa22.15■■□□□ 1.14
CPSF4-204ENST00000436336 GOLGA4Q13439 2230 aaKnown RBP22.15■■□□□ 1.14
CPSF4-204ENST00000436336 LNP1A1A4G5 178 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 MANBAO00462 879 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 ULK1O75385 1050 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 FKBP9O95302 570 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 ZNF806P0C7X5 589 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 UGT2B7P16662 529 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 HRH2P25021 359 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 CXCR2P25025 360 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 HTR6P50406 440 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 ZNF33BQ06732 778 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 SLBPQ14493 270 aaKnown RBP eCLIP22.14■■□□□ 1.14
CPSF4-204ENST00000436336 HIST2H2ACQ16777 129 aaPredicted RBP22.14■■□□□ 1.14
CPSF4-204ENST00000436336 HIST2H2AA3Q6FI13 130 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 OR6C4Q8NGE1 309 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 CCT6BQ92526 530 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 RSC1A1Q92681 617 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 PRR11Q96HE9 360 aaPredicted RBP22.14■■□□□ 1.14
CPSF4-204ENST00000436336 PPP1R36Q96LQ0 422 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 APOLD1Q96LR9 279 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 PADI4Q9UM07 663 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 BTRCQ9Y297 605 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 VPS13AQ96RL7 3174 aa22.14■■□□□ 1.14
CPSF4-204ENST00000436336 H7BY64 318 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 SDHDO14521 159 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 SIGLEC6O43699 453 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 AMD1P17707 334 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 GPR3P46089 330 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 IFT88Q13099 833 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 NR1D2Q14995 579 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 SLC5A12Q1EHB4 618 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 FRG2Q64ET8 278 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 ARMC6Q6NXE6 501 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 MED27Q6P2C8 311 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 KRT78Q8N1N4 520 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 EID2Q8N6I1 236 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 UBE2E3Q969T4 207 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms