RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MS4A12Q9NXJ0 267 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 DUSP12Q9UNI6 340 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 ERVW-1Q9UQF0 538 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CFL2Q9Y281 166 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 PARP14Q460N5 1801 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 A0A0G2JMZ2 1700 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 LRRC37A2A6NM11 1700 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 GPR32O75388 356 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 SNX4O95219 450 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 TNFRSF1BP20333 461 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 MYL9P24844 172 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 PARP15Q460N3 678 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 C10orf62Q5T681 223 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 DPY19L3Q6ZPD9 716 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 DNAJC22Q8N4W6 341 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 C3orf58Q8NDZ4 430 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 DEDD2Q8WXF8 326 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 COL21A1Q96P44 957 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 FEVQ99581 238 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 QTRT2Q9H974 415 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 ABCC13Q9NSE7 274 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 FKBPLQ9UIM3 349 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 ITM2BQ9Y287 266 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 A3GALT2U3KPV4 340 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 MCM3APO60318 1980 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 TREHO43280 583 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 NOS1APO75052 506 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 TMCC2O75069 709 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 TSPAN12O95859 305 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 GLUD1P00367 558 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 FGF1P05230 155 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 BCKDHAP12694 445 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 KCNE1P15382 129 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 POU1F1P28069 291 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 MC4RP32245 332 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 RUNX1T1Q06455 604 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 OR4F3Q6IEY1 312 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 ZNF551Q7Z340 670 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 WDR36Q8NI36 951 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 EGLN2Q96KS0 407 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 RPRD1AQ96P16 312 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 CPPED1Q9BRF8 314 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 SPON2Q9BUD6 331 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 NMUR1Q9HB89 426 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 WWOXQ9NZC7 414 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 HAS3O00219 553 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 DDX5P17844 614 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 HLA-DPA1P20036 260 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 OR1E1P30953 314 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 RPS19P39019 145 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 BTBD16Q32M84 506 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 USP39Q53GS9 565 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 PDZK1Q5T2W1 519 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 ANGPTL8Q6UXH0 198 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 FAM109AQ8N4B1 249 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 PAF1Q8N7H5 531 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 YIPF7Q8N8F6 280 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 CD200R1Q8TD46 325 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 PANX1Q96RD7 426 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 MCCC1Q96RQ3 725 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 ZYG11BQ9C0D3 744 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 ABCB9Q9NP78 766 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 OLA1Q9NTK5 396 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 SNX7Q9UNH6 387 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 DLGAP4Q9Y2H0 992 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 HSPB11Q9Y547 144 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 PCM1Q15154 2024 aa11.22□□□□□ -0.61
HMGCS1-202ENST00000433297 A0A1W2PQH9 124 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 PDHXO00330 501 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 FFAR2O15552 330 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 RAMP2O60895 175 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 TNFRSF21O75509 655 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 CKMT1AP12532 417 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 KDELR2P33947 212 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 BRCC3P46736 316 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 RPS14P62263 151 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 HOXC5Q00444 222 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 SCN1BQ07699 218 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 ABHD18Q0P651 414 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 CSTF3Q12996 717 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 CYP27C1Q4G0S4 372 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 MANEALQ5VSG8 457 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 LIMS2Q7Z4I7 341 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 GLCCI1Q86VQ1 547 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 ZSWIM9Q86XI8 627 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 CACTIN-AS1Q8N1I8 211 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 FRMD6Q96NE9 622 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 GFM1Q96RP9 751 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 CLMPQ9H6B4 373 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 SLC6A14Q9UN76 642 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 PCDHGB2Q9Y5G2 931 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 PTCH2Q9Y6C5 1203 aa11.21□□□□□ -0.61
HMGCS1-202ENST00000433297 LOC730098B7Z3J9 87 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 TBX18O95935 607 aa11.21□□□□□ -0.62
HMGCS1-202ENST00000433297 UBL4AP11441 157 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms