RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MT-ND3P03897 115 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 KLK3P07288 261 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 C8GP07360 202 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 GSTA2P09210 222 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CCDC166P0CW27 439 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CYP2A7P20853 494 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 F8A1P23610 371 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CMPK1P30085 196 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PHBP35232 272 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 SPRP35270 261 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 GABRA4P48169 554 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ITGA1P56199 1179 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 TAP2Q03519 686 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 GPS2Q13227 327 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ERV3-1Q14264 604 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 FRG1Q14331 258 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 USP10Q14694 798 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC9A5Q14940 896 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CYP2A13Q16696 494 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PTCHD3Q3KNS1 767 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ATP1A1-AS1Q5TC04 95 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 GRTP1Q5TC63 336 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 FAM69BQ5VUD6 431 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 FRMPD2BQ6IN97 320 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 FBXO42Q6P3S6 717 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CYB5D1Q6P9G0 228 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 AGTRAPQ6RW13 159 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 RAPH1Q70E73 1250 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ADCK2Q7Z695 626 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 GALNT7Q86SF2 657 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PLD3Q8IV08 490 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 MCATQ8IVS2 390 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 IFT20Q8IY31 132 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 GPR135Q8IZ08 494 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 OR4N4Q8N0Y3 316 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CARFQ8N187 725 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 DNAJC22Q8N4W6 341 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ESX1Q8N693 406 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 METTL27Q8N6F8 245 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZNF655Q8N720 491 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 OR2L3Q8NG85 312 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ANKRD49Q8WVL7 239 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 NANOS1Q8WY41 292 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 SMPDL3AQ92484 453 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 SEC14L1Q92503 715 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZUFSPQ96AP4 578 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 KIAA1143Q96AT1 154 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PYCR2Q96C36 320 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CCDC138Q96M89 665 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PRAP1Q96NZ9 151 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 FCRL4Q96PJ5 515 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 RUFY1Q96T51 708 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 RBBP8Q99708 897 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CPNE1Q99829 537 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 DPH7Q9BTV6 452 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 RAB11FIP5Q9BXF6 653 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 TRIM54Q9BYV2 358 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CDC42EP4Q9H3Q1 356 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 RHOJQ9H4E5 214 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ACTR5Q9H9F9 607 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PARVBQ9HBI1 364 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 MRPS30Q9NP92 439 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 LHX9Q9NQ69 397 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 INTS7Q9NVH2 962 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ARL15Q9NXU5 204 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 NSMCE4AQ9NXX6 385 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 EURLQ9NYK6 297 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 NINJ2Q9NZG7 142 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 SPATA7Q9P0W8 599 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 KLHL42Q9P2K6 505 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 DHCR7Q9UBM7 475 aaKnown RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 TAC3Q9UHF0 121 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 DCTN4Q9UJW0 460 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CROTQ9UKG9 612 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 ACSL6Q9UKU0 697 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 PLCL2Q9UPR0 1127 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 TMEM184BQ9Y519 407 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 CACNA1AO00555 2505 aa5.54□□□□□ -1.52
HMGB3P24-201ENST00000433260 FEZF1A0PJY2 475 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 HYKKA2RU49 373 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 NCF1BA6NI72 391 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 NCF1CA8MVU1 366 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 TARM1B6A8C7 271 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 K7ENP7 123 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 EIF3FO00303 357 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC16A5O15375 505 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CTSVO60911 334 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CPNE3O75131 537 aaKnown RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 TSPAN12O95859 305 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 C1QAP02745 245 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 PRKAR1AP10644 381 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 NCF1P14598 390 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 STMN1P16949 149 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 AGXTP21549 392 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 MAPK1P28482 360 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 IMPA1P29218 277 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 ECHS1P30084 290 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 STX2P32856 288 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms