RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 GPAT3Q53EU6 434 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 SPANXN2Q5MJ10 180 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 ESRP1Q6NXG1 681 aaKnown RBP7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 DLEU7Q6UYE1 221 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 ZNF767PQ75MW2 155 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 BNIPLQ7Z465 357 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 TMEM179BQ7Z7N9 219 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 PLCZ1Q86YW0 608 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 TP53I13Q8NBR0 393 aaPredicted RBP7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 ZNF540Q8NDQ6 660 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 KBTBD8Q8NFY9 601 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 MRPS31Q92665 395 aaKnown RBP7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 GTF2H4Q92759 462 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 SNAPC3Q92966 411 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 TRMT2BQ96GJ1 504 aaKnown RBP7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 NEDD4LQ96PU5 975 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 TRMT61BQ9BVS5 477 aaKnown RBP7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 ROGDIQ9GZN7 287 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 PIF1Q9H611 641 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 POLR3BQ9NW08 1133 aaPredicted RBP7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 ZIM2Q9NZV7 527 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 RNF6Q9Y252 685 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 ORC6Q9Y5N6 252 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 BPTFQ12830 3046 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 KMT2EQ8IZD2 1858 aa7.5□□□□□ -1.21
CNKSR3-202ENST00000433165 MYO7AQ13402 2215 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 FAM234BA2RU67 622 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 M0R082 166 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 GABRDO14764 452 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 SLC22A3O75751 556 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TSPAN9O75954 239 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 SLITRK5O94991 958 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 SLC4A1P02730 911 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 GADD45AP24522 165 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 PIK3CBP42338 1070 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 MLLT3P42568 568 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 POLR2JP52435 117 aaKnown RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 BCAT1P54687 386 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 SEMA3BQ13214 749 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TNK1Q13470 666 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 MLF2Q15773 248 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 PLA2G4EQ3MJ16 856 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 PIK3R6Q5UE93 754 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 KIAA0930Q6ICG6 404 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ENPP6Q6UWR7 440 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 LIMS2Q7Z4I7 341 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 DNAJB7Q7Z6W7 309 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ISCA2Q86U28 154 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 HIPK1Q86Z02 1210 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 CHPFQ8IZ52 775 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TCTE3Q8IZS6 198 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ZMIZ2Q8NF64 920 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 OR10T2Q8NGX3 314 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 BLOC1S5Q8TDH9 187 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 CSGALNACT1Q8TDX6 532 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ANKRD49Q8WVL7 239 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 RHBDF1Q96CC6 855 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 SLC47A1Q96FL8 570 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TSPAN17Q96FV3 270 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TEKT5Q96M29 485 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 RHNO1Q9BSD3 238 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TRAF4Q9BUZ4 470 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 GABARAPL1Q9H0R8 117 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 C8orf33Q9H7E9 229 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ACTR8Q9H981 624 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ZNF556Q9HAH1 456 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 RANGRFQ9HD47 186 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 C12orf4Q9NQ89 552 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TREX1Q9NSU2 369 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 WDR70Q9NW82 654 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ABI2Q9NYB9 513 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 INVSQ9Y283 1065 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 NEUROG3Q9Y4Z2 214 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 LEUTXA8MZ59 168 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 STK25O00506 426 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 GNGT2O14610 69 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 BET1O15155 118 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 PDPK1O15530 556 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 CEBPBP17676 345 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 PRKACGP22612 351 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 IL32P24001 234 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 PTGS2P35354 604 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 HNF4AP41235 474 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 MATKP42679 507 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 KCNC1P48547 511 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 STARD6P59095 220 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 UFM1P61960 85 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 NTHL1P78549 312 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 FAPQ12884 760 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 LAPTM5Q13571 262 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TBCEQ15813 527 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 SLC25A52Q3SY17 297 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 OTUD1Q5VV17 481 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 TIGD3Q6B0B8 471 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 SLC46A3Q7Z3Q1 461 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 KCTD20Q7Z5Y7 419 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 UNC93AQ86WB7 457 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 OSTM1Q86WC4 334 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 ZFAND4Q86XD8 727 aa7.49□□□□□ -1.21
CNKSR3-202ENST00000433165 PAF1Q8N7H5 531 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms