RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 EEF1AKMT1Q8WVE0 214 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 RERGQ96A58 199 aaPredicted RBP16.81■□□□□ 0.28
NUP50-208ENST00000430547 COL26A1Q96A83 441 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 CABS1Q96KC9 395 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 PWWP2AQ96N64 755 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 WDR54Q9H977 334 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 CCDC177Q9NQR7 707 aaPredicted RBP16.81■□□□□ 0.28
NUP50-208ENST00000430547 ENAMQ9NRM1 1142 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 ZFATQ9P243 1243 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 CORO1CQ9ULV4 474 aaPredicted RBP16.81■□□□□ 0.28
NUP50-208ENST00000430547 PCDHGB7Q9Y5F8 929 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 MYO18BQ8IUG5 2567 aa16.81■□□□□ 0.28
NUP50-208ENST00000430547 CNOT3O75175 753 aaKnown RBP16.8■□□□□ 0.28
NUP50-208ENST00000430547 PDGFAP04085 211 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 HIST1H2AGP0C0S8 130 aaPredicted RBP16.8■□□□□ 0.28
NUP50-208ENST00000430547 HIST1H2ADP20671 130 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 IMPA1P29218 277 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 OR1D4P47884 311 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 PDIA2Q13087 525 aaKnown RBP16.8■□□□□ 0.28
NUP50-208ENST00000430547 TEDDM1Q5T9Z0 273 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 PRMT9Q6P2P2 845 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 PAQR3Q6TCH7 311 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 PAQR7Q86WK9 346 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 ANKMY2Q8IV38 441 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 SPNS2Q8IVW8 549 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 BBOF1Q8ND07 529 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 FDCSPQ8NFU4 85 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 LINGO1Q96FE5 620 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 HIST1H2AHQ96KK5 128 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 HIST1H2AJQ99878 128 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 H2AFJQ9BTM1 129 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 ZNF304Q9HCX3 659 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 SLC22A11Q9NSA0 550 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 P4HTMQ9NXG6 502 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 SLC17A6Q9P2U8 582 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 CDC23Q9UJX2 597 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 TEX264Q9Y6I9 313 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 MAU2Q9Y6X3 613 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 PCSK5Q92824 1860 aa16.8■□□□□ 0.28
NUP50-208ENST00000430547 H0YGG7 62 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 PRPF4O43172 522 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■■□ 23.9
NUP50-208ENST00000430547 KLHL41O60662 606 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 DPM1O60762 260 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 CEACAM4O75871 244 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 UMODP07911 640 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 ITGAXP20702 1163 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 GABRB3P28472 473 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 CDKN2DP55273 166 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 FOXL2P58012 376 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 IL2P60568 153 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 ARF3P61204 181 aaPredicted RBP16.79■□□□□ 0.28
NUP50-208ENST00000430547 TBPL1P62380 186 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 OCA2Q04671 838 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 CALCOCO2Q13137 446 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 NKG7Q16617 165 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 DCAF10Q5QP82 559 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 STEAP4Q687X5 459 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 FAM45BPQ6NSW5 357 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 HPS6Q86YV9 775 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 CSNK1A1LQ8N752 337 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 FAM45AQ8TCE6 357 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.79■□□□□ 0.28
NUP50-208ENST00000430547 NACC2Q96BF6 587 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 VPS50Q96JG6 964 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 CCDC138Q96M89 665 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 SLC26A1Q9H2B4 701 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 SOX17Q9H6I2 414 aaPredicted RBP16.79■□□□□ 0.28
NUP50-208ENST00000430547 PARVBQ9HBI1 364 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 MLXIPLQ9NP71 852 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 STOX2Q9P2F5 926 aaPredicted RBP16.79■□□□□ 0.28
NUP50-208ENST00000430547 CTSFQ9UBX1 484 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 CDC14AQ9UNH5 594 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 SNX24Q9Y343 169 aa16.79■□□□□ 0.28
NUP50-208ENST00000430547 IGKV1-8A0A0C4DH67 115 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 AGPSO00116 658 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 TXNDC9O14530 226 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 SLC16A5O15375 505 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 ONECUT2O95948 504 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 ALPPP05187 535 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 FBLP22087 321 aaKnown RBP16.78■□□□□ 0.28
NUP50-208ENST00000430547 MMP11P24347 488 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 HRH2P25021 359 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 CASQ1P31415 396 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 RPL21P46778 160 aaKnown RBP16.78■□□□□ 0.28
NUP50-208ENST00000430547 RAPSNQ13702 412 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 HECTD2Q5U5R9 776 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 PRAMEF13Q5VWM6 474 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 ZNF425Q6IV72 752 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 FBXO42Q6P3S6 717 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 TRMT10BQ6PF06 316 aaKnown RBP16.78■□□□□ 0.28
NUP50-208ENST00000430547 COX15Q7KZN9 410 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 PPP1R32Q7Z5V6 425 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 FBXO36Q8NEA4 188 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 ALKBH8Q96BT7 664 aaKnown RBP16.78■□□□□ 0.28
NUP50-208ENST00000430547 NUDT9Q9BW91 350 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 TRIM54Q9BYV2 358 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 PCBD2Q9H0N5 130 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 ZNF282Q9UDV7 671 aaPredicted RBP16.78■□□□□ 0.28
NUP50-208ENST00000430547 ADAMTS6Q9UKP5 1117 aa16.78■□□□□ 0.28
NUP50-208ENST00000430547 PDE10AQ9Y233 779 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms