RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 DDX6P26196 483 aaKnown RBP eCLIP13.39□□□□□ -0.274e-6■□□□□ 11.1
SMARCA4-202ENST00000413806 MYBPC3Q14896 1274 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 DUOXA1Q1HG43 343 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 ERMP1Q7Z2K6 904 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 NUDT13Q86X67 352 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 GAL3ST3Q96A11 431 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 KIAA1191Q96A73 305 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 PIWIL1Q96J94 861 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 RPL10LQ96L21 214 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 CDK15Q96Q40 435 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 FARSBQ9NSD9 589 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 MKS1Q9NXB0 559 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 OAZ3Q9UMX2 235 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 POFUT2Q9Y2G5 429 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 LRRC72A6NJI9 287 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 GIMD1P0DJR0 217 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 RHDQ02161 417 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 CAMK1Q14012 370 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 BRAT1Q6PJG6 821 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 GPR88Q9GZN0 384 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 IL36AQ9UHA7 158 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 SETD1AO15047 1707 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 LCHNA4D1U4 455 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 C9IYK1 514 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 J3KR12 359 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 FZD9O00144 591 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 RASGRP1O95267 797 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 CCR8P51685 355 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 GJA9P57773 515 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 FRG2Q64ET8 278 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 FAM91A1Q658Y4 838 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 AMZ2Q86W34 360 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 CILP2Q8IUL8 1156 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 SIAH1Q8IUQ4 282 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 LMLNQ96KR4 655 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 FRG2BQ96QU4 278 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 OR2AG1Q9H205 316 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 RNF39Q9H2S5 420 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 ANKHQ9HCJ1 492 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 MAB21L2Q9Y586 359 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 A0A1W2PP18 115 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 IGFBP4P22692 258 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 STOMP27105 288 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 STC1P52823 247 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 CSTF1Q05048 431 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 SP140Q13342 867 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 SERINC3Q13530 473 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 IDNKQ5T6J7 187 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF433Q8N7K0 673 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 GEMIN6Q8WXD5 167 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 TMBIM1Q969X1 311 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 C12orf66Q96MD2 445 aa13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 MTERF1Q99551 399 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 MRPS30Q9NP92 439 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-202ENST00000413806 CLIC1O00299 241 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TBX18O95935 607 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 GSK3BP49841 420 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 GOLGA7Q7Z5G4 137 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 FAM129CQ86XR2 697 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 OR4C6Q8NH72 309 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 STOML3Q8TAV4 291 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TSEN15Q8WW01 171 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 SMOQ99835 787 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 CCM2Q9BSQ5 444 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 CFL2Q9Y281 166 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 NUP188Q5SRE5 1749 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 DUXAA6NLW8 204 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 MANBAO00462 879 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 PDCD5O14737 125 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 RPS3P23396 243 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 CBFBQ13951 182 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 GRB14Q14449 540 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TBRG1Q3YBR2 411 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 FBXO43Q4G163 708 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 LINC00471Q8N535 108 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TSGA13Q96PP4 275 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 FZD4Q9ULV1 537 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TMEM233B4DJY2 109 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 POU2F1P14859 743 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF30P17039 623 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 ENGP17813 658 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 DSTNP60981 165 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TARDBPQ13148 414 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 LYSMD3Q7Z3D4 306 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 ZUFSPQ96AP4 578 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 C5orf34Q96MH7 638 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 PKP2Q99959 881 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 POLR2J3Q9H1A7 115 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 PIRO00625 290 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 MATN4O95460 622 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 SERPINA3P01011 423 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 VIPR1P32241 457 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 MAGEA11P43364 429 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms