RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	FOXR1	Q6PIV2	292 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	ADCK2	Q7Z695	626 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	EXOC3L1	Q86VI1	746 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	MARCH9	Q86YJ5	346 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	SLC22A9	Q8IVM8	553 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	TMEM151A	Q8N4L1	468 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	SNX31	Q8N9S9	440 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	SLC5A11	Q8WWX8	675 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	N4BP2L2	Q92802	583 aa	Predicted RBP	12.65	□□□□□ -0.38
SF1-206	ENST00000413725	ESAM	Q96AP7	390 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	CCDC126	Q96EE4	140 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	PHF21B	Q96EK2	531 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	OR4K3	Q96R72	315 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	SCNM1	Q9BWG6	230 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	TMEM184C	Q9NVA4	438 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	GPRC5B	Q9NZH0	403 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	KLK13	Q9UKR3	277 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	EMCN	Q9ULC0	261 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	KLHL20	Q9Y2M5	609 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	PLLP	Q9Y342	182 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	ANGPTL3	Q9Y5C1	460 aa		12.65	□□□□□ -0.38
SF1-206	ENST00000413725	ACACA	Q13085	2346 aa		12.65	□□□□□ -0.39
SF1-206	ENST00000413725		A8MT66	165 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725		B4E171	279 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	AGPS	O00116	658 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	CLGN	O14967	610 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	SBK3	P0C264	359 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	EBLN1	P0CF75	366 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	CDH1	P12830	882 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	GNAZ	P19086	355 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	GRK3	P35626	688 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	TSPAN7	P41732	249 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	CCR8	P51685	355 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	RAB15	P59190	212 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	GABRE	P78334	506 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	MC2R	Q01718	297 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	FOXM1	Q08050	763 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	KCNAB1	Q14722	419 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	AGBL2	Q5U5Z8	902 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	FCRL6	Q6DN72	434 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	ZNF425	Q6IV72	752 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	ZYG11A	Q6WRX3	759 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	TMPRSS11B	Q86T26	416 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	TBC1D19	Q8N5T2	526 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	TCP10L	Q8TDR4	215 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	NEIL2	Q969S2	332 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	NXPE2	Q96DL1	559 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	PLCD4	Q9BRC7	762 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	NRSN2	Q9GZP1	204 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	POLR1B	Q9H9Y6	1135 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	PELI2	Q9HAT8	420 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	CUEDC1	Q9NWM3	386 aa	Predicted RBP	12.64	□□□□□ -0.39
SF1-206	ENST00000413725	OCIAD1	Q9NX40	245 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	SIDT1	Q9NXL6	827 aa	Known RBP	12.64	□□□□□ -0.39
SF1-206	ENST00000413725	SLC39A1	Q9NY26	324 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	PISD	Q9UG56	409 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	WASF3	Q9UPY6	502 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	SH2B3	Q9UQQ2	575 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	PCDHGA8	Q9Y5G5	932 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	CCDC88C	Q9P219	2028 aa		12.64	□□□□□ -0.39
SF1-206	ENST00000413725	NCOR2	Q9Y618	2525 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	IGKV1-8	A0A0C4DH67	115 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	OR2A25	A4D2G3	310 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725		H7BY64	318 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	TYROBP	O43914	113 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	DLX3	O60479	287 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	PRAMEF10	O60809	474 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	KATNA1	O75449	491 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	SIX3	O95343	332 aa	Predicted RBP	12.63	□□□□□ -0.39
SF1-206	ENST00000413725	MSL3P1	P0C860	447 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	FGF3	P11487	239 aa	Predicted RBP	12.63	□□□□□ -0.39
SF1-206	ENST00000413725	CCL4	P13236	92 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	HGF	P14210	728 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	CPA3	P15088	417 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	EZR	P15311	586 aa	Known RBP	12.63	□□□□□ -0.39
SF1-206	ENST00000413725	FOLR1	P15328	257 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	CREB1	P16220	341 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	EPB42	P16452	691 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	SPINK2	P20155	84 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	RBMS1	P29558	406 aa	Known RBP	12.63	□□□□□ -0.39
SF1-206	ENST00000413725	EEF1D	P29692	281 aa	Known RBP	12.63	□□□□□ -0.39
SF1-206	ENST00000413725	MAPK10	P53779	464 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	HERVK_113	P63132	956 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	YBX1	P67809	324 aa	Known RBP	12.63	□□□□□ -0.39
SF1-206	ENST00000413725	SH3BP2	P78314	561 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	RELA	Q04206	551 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	TUBB3	Q13509	450 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	IL11RA	Q14626	422 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	ZIC1	Q15915	447 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	TMEM164	Q5U3C3	297 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	CEACAM20	Q6UY09	585 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	BPHL	Q86WA6	291 aa	Predicted RBP	12.63	□□□□□ -0.39
SF1-206	ENST00000413725	PAQR7	Q86WK9	346 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	TEX9	Q8N6V9	391 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	BMPER	Q8N8U9	685 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	ARMC2	Q8NEN0	867 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	ABHD11	Q8NFV4	315 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	OR8K5	Q8NH50	307 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	TLCD1	Q96CP7	247 aa		12.63	□□□□□ -0.39
SF1-206	ENST00000413725	PRAP1	Q96NZ9	151 aa		12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms