RNA–Protein interactions for RNA: ENST00000413644.6

CD164-204, Transcript of CD164 molecule, human

TSL 1 (best) BASIC

Gene CD164, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD164-204	ENST00000413644	GRIP2	Q9C0E4	1043 aa		11.63	□□□□□ -0.55
CD164-204	ENST00000413644	OR2AG1	Q9H205	316 aa		11.63	□□□□□ -0.55
CD164-204	ENST00000413644	CAAP1	Q9H8G2	361 aa		11.63	□□□□□ -0.55
CD164-204	ENST00000413644	GPRC5B	Q9NZH0	403 aa		11.63	□□□□□ -0.55
CD164-204	ENST00000413644	MUC22	E2RYF6	1773 aa	Predicted RBP	11.63	□□□□□ -0.55
CD164-204	ENST00000413644	C2orf16	Q68DN1	1984 aa		11.63	□□□□□ -0.55
CD164-204	ENST00000413644	UPK1A	O00322	258 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	MMP20	O60882	483 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	DEAF1	O75398	565 aa	Predicted RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	PRSS23	O95084	383 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	C1orf105	O95561	183 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	C6	P13671	934 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	ADRB3	P13945	408 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	ZNF23	P17027	643 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	PRPS1L1	P21108	318 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	GSTT1	P30711	240 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	GPR1	P46091	355 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	RPS9	P46781	194 aa	Known RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	DDX39B	Q13838	428 aa	Known RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	ELAVL3	Q14576	367 aa	Known RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	EIF4H	Q15056	248 aa	Known RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	OR4F3	Q6IEY1	312 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	MSANTD1	Q6ZTZ1	278 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	SYT12	Q8IV01	421 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	C10orf111	Q8N326	155 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	FBXO30	Q8TB52	745 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	FGF13	Q92913	245 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	RMND5B	Q96G75	393 aa	Predicted RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	TTYH1	Q9H313	450 aa	Predicted RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	TMEM245	Q9H330	911 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	LIMD1	Q9UGP4	676 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	SZT2	Q5T011	3432 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	FAM220BP	B1ANY3	271 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	LZTS3	O60299	673 aa	Predicted RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	PCNA	P12004	261 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	NR1H2	P55055	460 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	MTAP	Q13126	283 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	ADRM1	Q16186	407 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	NKG7	Q16617	165 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	RAET1G	Q6H3X3	334 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	TRAPPC5	Q8IUR0	188 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	2e-12	■■□□□ 13.5
CD164-204	ENST00000413644	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	ZFAND2B	Q8WV99	257 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	CYGB	Q8WWM9	190 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	NCSTN	Q92542	709 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	FAM162A	Q96A26	154 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	FAM120B	Q96EK7	910 aa	Known RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	SGK2	Q9HBY8	427 aa		11.62	□□□□□ -0.55
CD164-204	ENST00000413644	SMPD3	Q9NY59	655 aa	Predicted RBP	11.62	□□□□□ -0.55
CD164-204	ENST00000413644	RFXANK	O14593	260 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	PRMT3	O60678	531 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	CREG1	O75629	220 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	PAPLN	O95428	1278 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	RANBP1	P43487	201 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	KIR3DL1	P43629	444 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	NRIP1	P48552	1158 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	HNRNPF	P52597	415 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	DPT	Q07507	201 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	RAB30	Q15771	203 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	UGT8	Q16880	541 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	TMEM214	Q6NUQ4	689 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	XKR5	Q6UX68	686 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	ARHGAP22	Q7Z5H3	698 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	GPR149	Q86SP6	731 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	OR7A2P	Q8NGA2	310 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	ZNF480	Q8WV37	535 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	TMBIM1	Q969X1	311 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	DGCR14	Q96DF8	476 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	C11orf24	Q96F05	449 aa	Predicted RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	PPP1R16A	Q96I34	528 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	BRF2	Q9HAW0	419 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	CLK4	Q9HAZ1	481 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	TRIM39	Q9HCM9	518 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	CD320	Q9NPF0	282 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	ATXN10	Q9UBB4	475 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	RUVBL1	Q9Y265	456 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	PCDHGA11	Q9Y5H2	935 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	C5orf42	Q9H799	3197 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	MAGEB17	A8MXT2	336 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	RET	P07949	1114 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	HSD3B1	P14060	373 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	FSHR	P23945	695 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	HSD3B2	P26439	372 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	MTHFR	P42898	656 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	SRSF11	Q05519	484 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	PON2	Q15165	354 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	SF1	Q15637	639 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	DPY19L1	Q2PZI1	675 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	TMEM52B	Q4KMG9	183 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	CYBRD1	Q53TN4	286 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	ADNP2	Q6IQ32	1131 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	RBM44	Q6ZP01	1051 aa	Known RBP	11.61	□□□□□ -0.55
CD164-204	ENST00000413644	GALNT15	Q8N3T1	639 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	DHRSX	Q8N5I4	330 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	TERB1	Q8NA31	727 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	OR7G3	Q8NG95	312 aa		11.61	□□□□□ -0.55
CD164-204	ENST00000413644	MAFA	Q8NHW3	353 aa	Predicted RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms