RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 BARD1Q99728 777 aaKnown RBP16.2■□□□□ 0.18
LIMS2-208ENST00000410011 RIBC2Q9H4K1 309 aa16.2■□□□□ 0.18
LIMS2-208ENST00000410011 EPS8L2Q9H6S3 715 aa16.2■□□□□ 0.18
LIMS2-208ENST00000410011 ATAD3AQ9NVI7 634 aa16.2■□□□□ 0.18
LIMS2-208ENST00000410011 ANAPC1Q9H1A4 1944 aa16.2■□□□□ 0.18
LIMS2-208ENST00000410011 PIKFYVEQ9Y2I7 2098 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 A0A1W2PQ45 241 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 A0A1W2PQY0 241 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 CLDN24A6NM45 220 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 RGS10O43665 173 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 JUPP14923 745 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 TPP2P29144 1249 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 CCR3P51677 355 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 WNT3P56703 355 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 CSTF3Q12996 717 aaKnown RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 SIM2Q14190 667 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 LIPJQ5W064 366 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ZCCHC8Q6NZY4 707 aaKnown RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 GALNT5Q7Z7M9 940 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 OR6Q1Q8NGQ2 317 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 STARD8Q92502 1023 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 VOPP1Q96AW1 172 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 PSD2Q9BQI7 771 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ACOT13Q9NPJ3 140 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 EXD2Q9NVH0 621 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 DOLKQ9UPQ8 538 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 NPIPB15A6NHN6 443 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ATP6V1G1O75348 118 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 EPN2O95208 641 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ENGP17813 658 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 FMO3P31513 532 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 HPCAL1P37235 193 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 NEK2P51955 445 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ITGA1P56199 1179 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 GTF2H3Q13889 308 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 KCNC3Q14003 757 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 HIST2H2ACQ16777 129 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 PTCHD3Q3KNS1 767 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ZSWIM9Q86XI8 627 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 PTOV1Q86YD1 416 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 RASGRP3Q8IV61 690 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 MFSD4AQ8N468 514 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 OR2AP1Q8NGE2 309 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 EGLN2Q96KS0 407 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 PANX1Q96RD7 426 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 MCCC1Q96RQ3 725 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 ASPSCR1Q9BZE9 553 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 REXO4Q9GZR2 422 aaKnown RBP16.19■□□□□ 0.18
LIMS2-208ENST00000410011 STARD7Q9NQZ5 370 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 DNAJC11Q9NVH1 559 aa16.19■□□□□ 0.18
LIMS2-208ENST00000410011 FPGTO14772 594 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 KPNA5O15131 536 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 NR4A1P22736 598 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 RXRGP48443 463 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 MASP1P48740 699 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 RPS3AP61247 264 aaKnown RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 IQCCQ4KMZ1 466 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 MLIPQ5VWP3 458 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 LAIR1Q6GTX8 287 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 TSPAN33Q86UF1 283 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 APOLD1Q96LR9 279 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 VN1R3Q9BXE9 311 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 PDP1Q9P0J1 537 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 KIAA1522Q9P206 1035 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 DAPK2Q9UIK4 370 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 MAPRE3Q9UPY8 281 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 CENPFP49454 3210 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 MAGEB17A8MXT2 336 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 SCAMP3O14828 347 aaKnown RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 ABCB1P08183 1280 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 CYP2A7P20853 494 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 FSHRP23945 695 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 PXNP49023 591 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 VLDLRP98155 873 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 PTSQ03393 145 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 PCDH1Q08174 1060 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 UGT8Q16880 541 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 ATP13A5Q4VNC0 1218 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 LDLRAP1Q5SW96 308 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 UBE2UQ5VVX9 321 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 DNAJB7Q7Z6W7 309 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 HORMAD1Q86X24 394 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 SYNPOQ8N3V7 929 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 CPXM2Q8N436 756 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 ZNF540Q8NDQ6 660 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 ZFP90Q8TF47 636 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 FCGR1BQ92637 280 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 TAMM41Q96BW9 452 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 C11orf24Q96F05 449 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-208ENST00000410011 EPYCQ99645 322 aa16.18■□□□□ 0.18
LIMS2-208ENST00000410011 KRBA1A5PL33 1030 aa16.17■□□□□ 0.18
LIMS2-208ENST00000410011 AXIN1O15169 862 aa16.17■□□□□ 0.18
LIMS2-208ENST00000410011 PRAMEF4O60810 478 aa16.17■□□□□ 0.18
LIMS2-208ENST00000410011 MT-ND2P03891 347 aa16.17■□□□□ 0.18
LIMS2-208ENST00000410011 GKP32189 559 aa16.17■□□□□ 0.18
LIMS2-208ENST00000410011 MAP2K4P45985 399 aa16.17■□□□□ 0.18
LIMS2-208ENST00000410011 DGKKQ5KSL6 1271 aa16.17■□□□□ 0.18
LIMS2-208ENST00000410011 PRAMEF9Q5VWM5 478 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms