RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GRASPQ7Z6J2 395 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 FOXRED2Q8IWF2 684 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 CENPLQ8N0S6 344 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 C1orf52Q8N6N3 182 aaKnown RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 FADS6Q8N9I5 356 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 MINDY2Q8NBR6 621 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 STEAP2Q8NFT2 490 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 OR4A16Q8NH70 328 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 SLC26A7Q8TE54 656 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 PPP4R1Q8TF05 950 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 U2AF1L4Q8WU68 220 aaKnown RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 TRIB2Q92519 343 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 ZNF75CPQ92670 426 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 MAP4K1Q92918 833 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 DHX58Q96C10 678 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 ZBTB18Q99592 522 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 FTHL17Q9BXU8 183 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 PRRG4Q9BZD6 226 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 NMNAT2Q9BZQ4 307 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 SLC39A8Q9C0K1 460 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 WWTR1Q9GZV5 400 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 SEMA6AQ9H2E6 1030 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 VAT1LQ9HCJ6 419 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 TRPV5Q9NQA5 729 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 GSN-AS1Q9NRJ2 163 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 PANK4Q9NVE7 773 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 RBM28Q9NW13 759 aaKnown RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 AIPL1Q9NZN9 384 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 FOXJ2Q9P0K8 574 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 PADI3Q9ULW8 664 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 RUVBL2Q9Y230 463 aaKnown RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 PFASO15067 1338 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 MAGEB16A2A368 324 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 HYKKA2RU49 373 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 SLC15A5A6NIM6 579 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TARM1B6A8C7 271 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TMEM150CB9EJG8 249 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 PRSS46E5RG02 174 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 MAPK13O15264 365 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 PSMD3O43242 534 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 ZIC3O60481 467 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TBX19O60806 448 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 STAG3L1P0CL83 205 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TAGLN2P37802 199 aaKnown RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 CLCNKAP51800 687 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 NANOS3P60323 173 aaKnown RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 SIM1P81133 766 aaPredicted RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 HSF2Q03933 536 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 SULT2A1Q06520 285 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 IL10RBQ08334 325 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 PDIA5Q14554 519 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 ZMYND11Q15326 602 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 EFNB3Q15768 340 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 KCTD21Q4G0X4 260 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 GRTP1Q5TC63 336 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 LYSMD4Q5XG99 296 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 CD164L2Q6UWJ8 174 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 ZNF813Q6ZN06 617 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TMEM26Q6ZUK4 368 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TAS2R42Q7RTR8 314 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 CHSY1Q86X52 802 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 NUDT13Q86X67 352 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 PALB2Q86YC2 1186 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 MISPQ8IVT2 679 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 FAM114A1Q8IWE2 563 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 STHQ8IWL8 128 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 CERS5Q8N5B7 392 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 BMPERQ8N8U9 685 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 PNLDC1Q8NA58 520 aaKnown RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 SIDT2Q8NBJ9 832 aaKnown RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 FAM98AQ8NCA5 519 aaKnown RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 HMGCLL1Q8TB92 370 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 FCGR1BQ92637 280 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 GGHQ92820 318 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 PYCR2Q96C36 320 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 RPGRIP1Q96KN7 1286 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TAAR6Q96RI8 345 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 COQ7Q99807 217 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 CCT7Q99832 543 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 GCOM2Q9BZD3 368 aaPredicted RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 TRPV6Q9H1D0 765 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 ACTR8Q9H981 624 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 CLK4Q9HAZ1 481 aaKnown RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 HOMER3Q9NSC5 361 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 DDX18Q9NVP1 670 aaKnown RBP4.64□□□□□ -1.67
LSM5-205ENST00000409952 ATXN10Q9UBB4 475 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 IL20RAQ9UHF4 553 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 TINAGQ9UJW2 476 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 PCDHA12Q9UN75 941 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 KLK4Q9Y5K2 254 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 SPACA6W5XKT8 324 aa4.64□□□□□ -1.67
LSM5-205ENST00000409952 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 A0A0U1RQJ8 604 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 A0A0U1RRA0 63 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 A0A1W2PP11 408 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 CASTOR2A6NHX0 329 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 ZSCAN5BA6NJL1 495 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 F8VVB4 439 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 F8VWA3 439 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 SMIM22K7EJ46 135 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms