RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 RNH1P13489 461 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 ZNF3P17036 446 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 HNRNPH3P31942 346 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 ETV3P41162 512 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 AFF3P51826 1226 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 SHHQ15465 462 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 DCAF12L1Q5VU92 463 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CCDC80Q76M96 950 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CILP2Q8IUL8 1156 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 PJA1Q8NG27 643 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 PTCHD1Q96NR3 888 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 OBP2AQ9NY56 170 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 ARMCX1Q9P291 453 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 PCDH10Q9P2E7 1040 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 IRAK3Q9Y616 596 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 COL22A1Q8NFW1 1626 aaPredicted RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 GPR89AB7ZAQ6 455 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 MTX2O75431 263 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 SERPINA6P08185 405 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 GPR89BP0CG08 455 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 RORAP35398 523 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 LRP8Q14114 963 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 FAM26DQ5JW98 314 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 OR13C4Q8NGS5 318 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 SLC44A1Q8WWI5 657 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TRMT2BQ96GJ1 504 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 FGFBP2Q9BYJ0 223 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 PCDHB16Q9NRJ7 776 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 HEBP1Q9NRV9 189 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ATXN10Q9UBB4 475 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CNOT6Q9ULM6 557 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 BTBD3Q9Y2F9 522 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TOGARAM1Q9Y4F4 1720 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 MAST2Q6P0Q8 1798 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 MAGEA13PA6NCF6 341 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 EPHB6O15197 1021 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 RGS20O76081 388 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 FAM58BPP0C7Q3 252 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 FAUP35544 74 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 KCNC1P48547 511 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 RAB25P57735 213 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 EEFSECP57772 596 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 IFI35P80217 286 aaPredicted RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 PLCXD2Q0VAA5 305 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 HYAL2Q12891 473 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 DSG2Q14126 1118 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 PUM1Q14671 1186 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP47-203ENST00000399455 UXS1Q8NBZ7 420 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 OR2L5Q8NG80 312 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 OR4K14Q8NGD5 310 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 OR52E4Q8NGH9 312 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 PNPT1Q8TCS8 783 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 PHOSPHO1Q8TCT1 267 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 KCNC2Q96PR1 638 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CCNL2Q96S94 520 aaPredicted RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 COQ7Q99807 217 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 NGBQ9NPG2 151 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 BLACEA4D250 179 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 G3V2T6 193 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ITGB1P05556 798 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 MARCKSL1P49006 195 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TRAF3Q13114 568 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 WASHC2DQ5SRD0 308 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 AP1ARQ63HQ0 302 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 OR6N1Q8NGY5 312 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CDKN2AIPNLQ96HQ2 116 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 FAM84AQ96KN4 292 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 OR8D2Q9GZM6 311 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 FZD3Q9NPG1 666 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 STYXL1Q9Y6J8 313 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TULP3O75386 442 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TGFB1P01137 390 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 KLK1P06870 262 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 LINGO3P0C6S8 592 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ITGB7P26010 798 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ACRV1P26436 265 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 RPS9P46781 194 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 CDH13P55290 713 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TAB1Q15750 504 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 SNAPC1Q16533 368 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 AAGABQ6PD74 315 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 C6orf120Q7Z4R8 191 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 NXPE1Q8N323 547 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 PCDH19Q8TAB3 1148 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 LGR4Q9BXB1 951 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 VRTNQ9H8Y1 702 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 SLC35C2Q9NQQ7 365 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CRNNQ9UBG3 495 aaPredicted RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 SPEF1Q9Y4P9 236 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 KIR2DS5A0A0G2JLQ3 304 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 A0A0G2JNG1 304 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 GRXCR1A8MXD5 290 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 KIR2DS3K7RE56 304 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TFECO14948 347 aaPredicted RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 ADAMDEC1O15204 470 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 MED26O95402 600 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ASGR2P07307 311 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 MYCLP1P12525 358 aaPredicted RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 DNAJA1P31689 397 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 UBE2NP61088 152 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms