RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PCDHB3Q9Y5E6 796 aa16.97■□□□□ 0.31
CTNS-203ENST00000399306 B3GALT1Q9Y5Z6 326 aa16.97■□□□□ 0.31
CTNS-203ENST00000399306 KCNE2Q9Y6J6 123 aa16.97■□□□□ 0.31
CTNS-203ENST00000399306 AP1M2Q9Y6Q5 423 aa16.97■□□□□ 0.31
CTNS-203ENST00000399306 MDC1Q14676 2089 aaKnown RBP16.97■□□□□ 0.31
CTNS-203ENST00000399306 IGF2RP11717 2491 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 IGKV1-8A0A0C4DH67 115 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 H3BMH7 237 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 MAP2K7O14733 419 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 PRAMEF10O60809 474 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 STK16O75716 305 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 KRT15P19012 456 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 ALDH18A1P54886 795 aaKnown RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 ITGA1P56199 1179 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 PCBP4P57723 403 aaKnown RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 PCDH1Q08174 1060 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 TSTA3Q13630 321 aaPredicted RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 KCNAB1Q14722 419 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 TCTE1Q5JU00 501 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 BEND6Q5SZJ8 279 aaPredicted RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 YOD1Q5VVQ6 348 aaPredicted RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 LRIG3Q6UXM1 1119 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 LRRC70Q7Z2Q7 622 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 THOC6Q86W42 341 aaKnown RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 MYRIPQ8NFW9 859 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 OR4K1Q8NGD4 311 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 LRFN5Q96NI6 719 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 OR4K3Q96R72 315 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 ZFYVE21Q9BQ24 234 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 FAM117AQ9C073 453 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 UNKQ9C0B0 810 aaKnown RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 APMAPQ9HDC9 416 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 PCMTD2Q9NV79 361 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 MKS1Q9NXB0 559 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 WWOXQ9NZC7 414 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 TNPO3Q9Y5L0 923 aaKnown RBP16.96■□□□□ 0.31
CTNS-203ENST00000399306 SDK2Q58EX2 2172 aa16.96■□□□□ 0.31
CTNS-203ENST00000399306 FREM2Q5SZK8 3169 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 URB1O60287 2271 aaKnown RBP16.95■□□□□ 0.3
CTNS-203ENST00000399306 KCNE1BA0A087WTH5 132 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 C1QTNF9BB2RNN3 333 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 SUPT3HB4E1H0 165 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 STMND1H3BQB6 276 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 TAPBPO15533 448 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 SUPT3HO75486 399 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 HBQ1P09105 142 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 C1QTNF9P0C862 333 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 GNAZP19086 355 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 SLCO1A2P46721 670 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 CCT5P48643 541 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 EMP3P54852 163 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 GPR19Q15760 415 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 TLDC1Q6P9B6 456 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 DTX1Q86Y01 620 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 MCATQ8IVS2 390 aaKnown RBP16.95■□□□□ 0.3
CTNS-203ENST00000399306 GPR135Q8IZ08 494 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 ZNF248Q8NDW4 579 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 OR2W6PQ8NHA6 318 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 N4BP2L2Q92802 583 aaPredicted RBP16.95■□□□□ 0.3
CTNS-203ENST00000399306 TMEM79Q9BSE2 394 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 DPH1Q9BZG8 443 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 CD244Q9BZW8 370 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 PITHD1Q9GZP4 211 aaPredicted RBP16.95■□□□□ 0.3
CTNS-203ENST00000399306 EHD1Q9H4M9 534 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 PELI2Q9HAT8 420 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 SENP1Q9P0U3 644 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 SLC22A14Q9Y267 594 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 DYRK1BQ9Y463 629 aa16.95■□□□□ 0.3
CTNS-203ENST00000399306 ASPMQ8IZT6 3477 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 FITM1A5D6W6 292 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 TMEM150CB9EJG8 249 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 STX16-NPEPL1H3BU86 382 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 UBXN8O00124 270 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 TXNDC9O14530 226 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 STX16O14662 325 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 GLRA3O75311 464 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 DLGAP3O95886 979 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 LIPCP11150 499 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 PYGBP11216 843 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 CRHR1P34998 444 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 GRK3P35626 688 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 GMPRP36959 345 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 GLRBP48167 497 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 CCR8P51685 355 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 RPS15AP62244 130 aaKnown RBP16.94■□□□□ 0.3
CTNS-203ENST00000399306 SLC18A2Q05940 514 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 E2F2Q14209 437 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 SETDB1Q15047 1291 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 PCBP2Q15366 365 aaKnown RBP eCLIP16.94■□□□□ 0.3
CTNS-203ENST00000399306 FBXO42Q6P3S6 717 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 TRABD2AQ86V40 505 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 PROSER1Q86XN7 944 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 FAM20CQ8IXL6 584 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 CYP4X1Q8N118 509 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 MDM1Q8TC05 714 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 SLC5A11Q8WWX8 675 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 PYCR2Q96C36 320 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 KLHL25Q9H0H3 589 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 DNAJC11Q9NVH1 559 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms