RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ANKRD12Q6UB98 2062 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 SUPT3HB4E1H0 165 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 SUPT3HO75486 399 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 ITGB2P05107 769 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 COL6A2P12110 1019 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 PVRP15151 417 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 OAS2P29728 719 aaKnown RBP24.47■■□□□ 1.51
U2AF1-203ENST00000398137 RPA3P35244 121 aaPredicted RBP24.47■■□□□ 1.51
U2AF1-203ENST00000398137 KCNC1P48547 511 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 SEPHS1P49903 392 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 TBPL1P62380 186 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 CDKL1Q00532 357 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 ACAP2Q15057 778 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 TGFBIQ15582 683 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 TSNAXIP1Q2TAA8 658 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 TECRLQ5HYJ1 363 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 CEP85LQ5SZL2 805 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 LRRC56Q8IYG6 542 aaPredicted RBP24.47■■□□□ 1.51
U2AF1-203ENST00000398137 ATL1Q8WXF7 558 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 ALKBH8Q96BT7 664 aaKnown RBP24.47■■□□□ 1.51
U2AF1-203ENST00000398137 ATOH8Q96SQ7 321 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 ACAT2Q9BWD1 397 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 ZNF768Q9H5H4 540 aaKnown RBP24.47■■□□□ 1.51
U2AF1-203ENST00000398137 CD274Q9NZQ7 290 aa24.47■■□□□ 1.51
U2AF1-203ENST00000398137 TMEM184BQ9Y519 407 aaPredicted RBP24.47■■□□□ 1.51
U2AF1-203ENST00000398137 IGHV5-51A0A0C4DH38 117 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 DLGAP3O95886 979 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 ANXA5P08758 320 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 ATP1A2P50993 1020 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 SH3BP2P78314 561 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 NAE1Q13564 534 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 CASP8Q14790 479 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 TBR1Q16650 682 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 LRIG3Q6UXM1 1119 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 CEACAM20Q6UY09 585 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 IL22RA1Q8N6P7 574 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 SLC22A18Q96BI1 424 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 RNF31Q96EP0 1072 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 MIPEPQ99797 713 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 PITPNM3Q9BZ71 974 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 CCDC177Q9NQR7 707 aaPredicted RBP24.46■■□□□ 1.51
U2AF1-203ENST00000398137 TAC3Q9UHF0 121 aa24.46■■□□□ 1.51
U2AF1-203ENST00000398137 A0A0J9YY10 115 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 UBXN8O00124 270 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 PRICKLE3O43900 615 aaPredicted RBP24.45■■□□□ 1.5
U2AF1-203ENST00000398137 S100BP04271 92 aaPredicted RBP24.45■■□□□ 1.5
U2AF1-203ENST00000398137 ZNF28P17035 718 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 SLC5A12Q1EHB4 618 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 ZXDCQ2QGD7 858 aaPredicted RBP24.45■■□□□ 1.5
U2AF1-203ENST00000398137 C18orf21Q32NC0 220 aaPredicted RBP24.45■■□□□ 1.5
U2AF1-203ENST00000398137 THEMIS2Q5TEJ8 643 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 ZNF605Q86T29 641 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 RHEBL1Q8TAI7 183 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 C1GALT1Q9NS00 363 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 NUDT4Q9NZJ9 180 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 XPR1Q9UBH6 696 aa24.45■■□□□ 1.5
U2AF1-203ENST00000398137 LOC101059948A0A1B0GTJ6 334 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 SLC9B1P1A6NJY1 282 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 POLR1CO15160 346 aaPredicted RBP24.44■■□□□ 1.5
U2AF1-203ENST00000398137 TOX3O15405 576 aaPredicted RBP24.44■■□□□ 1.5
U2AF1-203ENST00000398137 STK17BO94768 372 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 ST6GAL1P15907 406 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 SF1Q15637 639 aaKnown RBP24.44■■□□□ 1.5
U2AF1-203ENST00000398137 TRABD2AQ86V40 505 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 NLGN4XQ8N0W4 816 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 C4orf33Q8N1A6 199 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 NLGN4YQ8NFZ3 816 aaPredicted RBP24.44■■□□□ 1.5
U2AF1-203ENST00000398137 OR2A1Q8NGT9 310 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 KLHL6Q8WZ60 621 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 PYCR2Q96C36 320 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 RHBDF1Q96CC6 855 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 ZPBPQ9BS86 351 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 SOHLH2Q9NX45 425 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 WWOXQ9NZC7 414 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 SEMA5BQ9P283 1151 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 KLHL20Q9Y2M5 609 aa24.44■■□□□ 1.5
U2AF1-203ENST00000398137 UQCRHLA0A096LP55 91 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 CCDC189A1A4V9 331 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 SYCE1LA8MT33 242 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 RGS16O15492 202 aaPredicted RBP24.43■■□□□ 1.5
U2AF1-203ENST00000398137 UQCRHP07919 91 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 RBP1P09455 135 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 FAM87AP0C7U9 286 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 FBXO48Q5FWF7 155 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 PRAMEF13Q5VWM6 474 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 SH2D5Q6ZV89 423 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 SRRM1Q8IYB3 904 aaKnown RBP24.43■■□□□ 1.5
U2AF1-203ENST00000398137 CARFQ8N187 725 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 ZSCAN1Q8NBB4 408 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 PDPRQ8NCN5 879 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 OR2L3Q8NG85 312 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 OR56A3Q8NH54 315 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 TRAPPC9Q96Q05 1148 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 CENPHQ9H3R5 247 aa24.43■■□□□ 1.5
U2AF1-203ENST00000398137 CPSF2Q9P2I0 782 aaKnown RBP24.43■■□□□ 1.5
U2AF1-203ENST00000398137 B8ZZF3 427 aa24.42■■□□□ 1.5
U2AF1-203ENST00000398137 ZBTB11O95625 1053 aaPredicted RBP24.42■■□□□ 1.5
U2AF1-203ENST00000398137 KRT4P19013 534 aa24.42■■□□□ 1.5
U2AF1-203ENST00000398137 MAGP20916 626 aa24.42■■□□□ 1.5
U2AF1-203ENST00000398137 ARL4DP49703 201 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms